Literature DB >> 18470888

Metabolomic profiling using Orbitrap Fourier transform mass spectrometry with hydrophilic interaction chromatography: a method with wide applicability to analysis of biomolecules.

A Kamleh1, M P Barrett, D Wildridge, R J S Burchmore, R A Scheltema, D G Watson.   

Abstract

It was shown that coupling hydrophilic interaction chromatography (HILIC) to Orbitrap Fourier transform mass spectrometery (FT-MS) provided an excellent tool for metabolic profiling, principally due to rapid elution of lipids in advance of most metabolites entering the mass spectrometer. We used in vitro cultivated procyclic forms of the protozoan parasite Trypanosoma brucei as a source of metabolites to test the performance of the HILIC column and the mass accuracy of MS. The mass accuracy achieved fell within 2 ppm for all the metabolites identified within samples. It was, for example, possible to identify the signature metabolite of the trypanosome, trypanothione, and also glutathione which were well retained by the HILIC column. By comparing trypanosomes grown in two different media we were able to clearly distinguish the samples in terms of the relative abundance of a number of metabolites using Sieve 1.1 software.

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Year:  2008        PMID: 18470888     DOI: 10.1002/rcm.3564

Source DB:  PubMed          Journal:  Rapid Commun Mass Spectrom        ISSN: 0951-4198            Impact factor:   2.419


  29 in total

Review 1.  Lipidomic analysis of bacterial plasmalogens.

Authors:  Tomáš Řezanka; Zdena Křesinová; Irena Kolouchová; Karel Sigler
Journal:  Folia Microbiol (Praha)       Date:  2012-07-05       Impact factor: 2.099

Review 2.  Metabolomics: moving to the clinic.

Authors:  Anders Nordström; Rolf Lewensohn
Journal:  J Neuroimmune Pharmacol       Date:  2009-04-28       Impact factor: 4.147

Review 3.  Database resources in metabolomics: an overview.

Authors:  Eden P Go
Journal:  J Neuroimmune Pharmacol       Date:  2009-05-07       Impact factor: 4.147

4.  Identification of plasmalogen cardiolipins from Pectinatus by liquid chromatography-high resolution electrospray ionization tandem mass spectrometry.

Authors:  Tomáš Řezanka; Dagmar Matoulková; Lucie Kyselová; Karel Sigler
Journal:  Lipids       Date:  2013-10-10       Impact factor: 1.880

5.  Hydrophilic interaction liquid chromatography: ESI-MS/MS of plasmalogen phospholipids from Pectinatus bacterium.

Authors:  Tomáš Rezanka; Lucie Siristova; Dagmar Matoulková; Karel Sigler
Journal:  Lipids       Date:  2011-04-11       Impact factor: 1.880

6.  Metabolite identification and quantitation in LC-MS/MS-based metabolomics.

Authors:  Jun Feng Xiao; Bin Zhou; Habtom W Ressom
Journal:  Trends Analyt Chem       Date:  2012-02-01       Impact factor: 12.296

7.  Use of reconstituted metabolic networks to assist in metabolomic data visualization and mining.

Authors:  Fabien Jourdan; Ludovic Cottret; Laurence Huc; David Wildridge; Richard Scheltema; Anne Hillenweck; Michael P Barrett; Daniel Zalko; David G Watson; Laurent Debrauwer
Journal:  Metabolomics       Date:  2010-01-06       Impact factor: 4.290

8.  Metabolomics to unveil and understand phenotypic diversity between pathogen populations.

Authors:  Ruben t'Kindt; Richard A Scheltema; Andris Jankevics; Kirstyn Brunker; Suman Rijal; Jean-Claude Dujardin; Rainer Breitling; David G Watson; Graham H Coombs; Saskia Decuypere
Journal:  PLoS Negl Trop Dis       Date:  2010-11-30

9.  A molecular mechanism for eflornithine resistance in African trypanosomes.

Authors:  Isabel M Vincent; Darren Creek; David G Watson; Mohammed A Kamleh; Debra J Woods; Pui Ee Wong; Richard J S Burchmore; Michael P Barrett
Journal:  PLoS Pathog       Date:  2010-11-24       Impact factor: 6.823

Review 10.  Systems proteomics of healthy and diseased chromatin.

Authors:  Haodong Chen; Emma Monte; Thomas M Vondriska; Sarah Franklin
Journal:  Methods Mol Biol       Date:  2013
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