Literature DB >> 18470480

Mechanisms and structures of crotonase superfamily enzymes--how nature controls enolate and oxyanion reactivity.

R B Hamed1, E T Batchelar, I J Clifton, C J Schofield.   

Abstract

Structural and mechanistic studies on the crotonase superfamily (CS) are reviewed with the aim of illustrating how a conserved structural platform can enable catalysis of a very wide range of reactions. Many CS reactions have precedent in the 'carbonyl' chemistry of organic synthesis; they include alkene hydration/isomerization, aryl-halide dehalogenation, (de)carboxylation, CoA ester and peptide hydrolysis, fragmentation of beta-diketones and C-C bond formation, cleavage and oxidation. CS enzymes possess a canonical fold formed from repeated betabetaalpha units that assemble into two approximately perpendicular beta-sheets surrounded by alpha-helices. CS enzymes often, although not exclusively, oligomerize as trimers or dimers of trimers. Two conserved backbone NH groups in CS active sites form an oxyanion 'hole' that can stabilize enolate/oxyanion intermediates. The range and efficiency of known CS-catalyzed reactions coupled to their common structural platforms suggest that CS variants may have widespread utility in biocatalysis.

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Year:  2008        PMID: 18470480     DOI: 10.1007/s00018-008-8082-6

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  40 in total

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Review 7.  Enzyme (re)design: lessons from natural evolution and computation.

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10.  A tale of two functions: enzymatic activity and translational repression by carboxyltransferase.

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