Literature DB >> 18469903

A composite map of expressed sequences in maize.

M Causse, S Santoni, C Damerval, A Maurice, A Charcosset, J Deatrick, D Vienne.   

Abstract

A maize genetic map based mainly on expressed sequences has been constructed. The map incorporates data from four segregating populations. Three recombinant inbred line populations were derived from the nonreciprocal crosses between three inbred lines. A map derived from an independent F2 progeny from one of the crosses was also used. With a total of 521 genotyped individuals, accuracy in gene order is expected. Five sources of markers were used: (i) 109 loci corresponding to 69 genes of known function, (ii) 39 loci controlling protein position shifts revealed by two-dimensional electrophoresis, (iii) 8 isozyme loci, (iv) 17 loci corresponding to 14 sequenced cDNAs for which no homology was found in gene banks, and (v) 102 loci corresponding to 81 anonymous probes. As many loci were common to all maps, we tested heterogeneity between recombination fractions. The comparison of recombination fractions revealed: (i) a good correspondence between the maps derived from the same cross, (ii) few significant differences in interval distances, and (iii) global differences, which can reach 20% of the total map length. A composite map of 275 loci covering 1765 cM has been constructed. Key words : Zea mays L., RFLP, genetic map, molecular markers, proteins.

Entities:  

Year:  1996        PMID: 18469903     DOI: 10.1139/g96-053

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  32 in total

1.  A maize map standard with sequenced core markers, grass genome reference points and 932 expressed sequence tagged sites (ESTs) in a 1736-locus map.

Authors:  G L Davis; M D McMullen; C Baysdorfer; T Musket; D Grant; M Staebell; G Xu; M Polacco; L Koster; S Melia-Hancock; K Houchins; S Chao; E H Coe
Journal:  Genetics       Date:  1999-07       Impact factor: 4.562

2.  Ivr2, a candidate gene for a QTL of vacuolar invertase activity in maize leaves. Gene-specific expression under water stress.

Authors:  S Pelleschi; S Guy; J Y Kim; C Pointe; A Mahé; L Barthes; A Leonardi; J L Prioul
Journal:  Plant Mol Biol       Date:  1999-01       Impact factor: 4.076

3.  Marker-assisted introgression of favorable alleles at quantitative trait loci between maize elite lines.

Authors:  Agnès Bouchez; Frédéric Hospital; Mathilde Causse; André Gallais; Alain Charcosset
Journal:  Genetics       Date:  2002-12       Impact factor: 4.562

Review 4.  Molecular markers from the transcribed/expressed region of the genome in higher plants.

Authors:  P K Gupta; S Rustgi
Journal:  Funct Integr Genomics       Date:  2004-04-17       Impact factor: 3.410

5.  Mapping of a spontaneous mutation for early flowering time in maize highlights contrasting allelic series at two-linked QTL on chromosome 8.

Authors:  Fabien Chardon; Delphine Hourcade; Valérie Combes; Alain Charcosset
Journal:  Theor Appl Genet       Date:  2005-10-22       Impact factor: 5.699

6.  A composite linkage map from two crosses for the species complex Picea mariana x Picea rubens and analysis of synteny with other Pinaceae.

Authors:  Betty Pelgas; Jean Bousquet; Stéphanie Beauseigle; Nathalie Isabel
Journal:  Theor Appl Genet       Date:  2005-11-10       Impact factor: 5.699

7.  Use of trial clustering to study QTL x environment effects for grain yield and related traits in maize.

Authors:  Laurence Moreau; Alain Charcosset; André Gallais
Journal:  Theor Appl Genet       Date:  2004-11-12       Impact factor: 5.699

8.  Microsatellite marker polymorphism and mapping in pea (Pisum sativum L.).

Authors:  K Loridon; K McPhee; J Morin; P Dubreuil; M L Pilet-Nayel; G Aubert; C Rameau; A Baranger; C Coyne; I Lejeune-Hènaut; J Burstin
Journal:  Theor Appl Genet       Date:  2005-10-11       Impact factor: 5.699

9.  An integrated SSR map of grapevine based on five mapping populations.

Authors:  A Doligez; A F Adam-Blondon; G Cipriani; G Di Gaspero; V Laucou; D Merdinoglu; C P Meredith; S Riaz; C Roux; P This
Journal:  Theor Appl Genet       Date:  2006-06-24       Impact factor: 5.699

10.  Genetic variation for N-remobilization and postsilking N-uptake in a set of maize recombinant inbred lines. 3. QTL detection and coincidences.

Authors:  M Coque; A Martin; J B Veyrieras; B Hirel; A Gallais
Journal:  Theor Appl Genet       Date:  2008-06-20       Impact factor: 5.699

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