Literature DB >> 18467096

Ecology and genomics of Bacillus subtilis.

Ashlee M Earl1, Richard Losick, Roberto Kolter.   

Abstract

Bacillus subtilis is a remarkably diverse bacterial species that is capable of growth within many environments. Recent microarray-based comparative genomic analyses have revealed that members of this species also exhibit considerable genomic diversity. The identification of strain-specific genes might explain how B. subtilis has become so broadly adapted. The goal of identifying ecologically adaptive genes could soon be realized with the imminent release of several new B. subtilis genome sequences. As we embark upon this exciting new era of B. subtilis comparative genomics we review what is currently known about the ecology and evolution of this species.

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Year:  2008        PMID: 18467096      PMCID: PMC2819312          DOI: 10.1016/j.tim.2008.03.004

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  62 in total

Review 1.  Are viruses driving microbial diversification and diversity?

Authors:  Markus G Weinbauer; Fereidoun Rassoulzadegan
Journal:  Environ Microbiol       Date:  2004-01       Impact factor: 5.491

Review 2.  DNA uptake during bacterial transformation.

Authors:  Inês Chen; David Dubnau
Journal:  Nat Rev Microbiol       Date:  2004-03       Impact factor: 60.633

3.  Bacillus subtilis genome diversity.

Authors:  Ashlee M Earl; Richard Losick; Roberto Kolter
Journal:  J Bacteriol       Date:  2006-11-17       Impact factor: 3.490

Review 4.  Advanced sequencing technologies and their wider impact in microbiology.

Authors:  Neil Hall
Journal:  J Exp Biol       Date:  2007-05       Impact factor: 3.312

5.  Biocontrol of Bacillus subtilis against infection of Arabidopsis roots by Pseudomonas syringae is facilitated by biofilm formation and surfactin production.

Authors:  Harsh Pal Bais; Ray Fall; Jorge M Vivanco
Journal:  Plant Physiol       Date:  2003-12-18       Impact factor: 8.340

6.  Genes involved in formation of structured multicellular communities by Bacillus subtilis.

Authors:  Steven S Branda; José Eduardo González-Pastor; Etienne Dervyn; S Dusko Ehrlich; Richard Losick; Roberto Kolter
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

Review 7.  Multicellular behaviour and production of a wide variety of toxic substances support usage of Bacillus subtilis as a powerful biocontrol agent.

Authors:  Krzysztofa Nagórska; Mariusz Bikowski; Michał Obuchowski
Journal:  Acta Biochim Pol       Date:  2007-09-17       Impact factor: 2.149

8.  Subtilosin production by two Bacillus subtilis subspecies and variance of the sbo-alb cluster.

Authors:  Torsten Stein; Stefanie Düsterhus; Anke Stroh; Karl-Dieter Entian
Journal:  Appl Environ Microbiol       Date:  2004-04       Impact factor: 4.792

9.  A degradation product of the salicylic acid pathway triggers oxidative stress resulting in down-regulation of Bacillus subtilis biofilm formation on Arabidopsis thaliana roots.

Authors:  Thimmaraju Rudrappa; William J Quinn; Nicola R Stanley-Wall; Harsh P Bais
Journal:  Planta       Date:  2007-02-15       Impact factor: 4.540

10.  Global genetic population structure of Bacillus anthracis.

Authors:  Matthew N Van Ert; W Ryan Easterday; Lynn Y Huynh; Richard T Okinaka; Martin E Hugh-Jones; Jacques Ravel; Shaylan R Zanecki; Talima Pearson; Tatum S Simonson; Jana M U'Ren; Sergey M Kachur; Rebecca R Leadem-Dougherty; Shane D Rhoton; Guenevier Zinser; Jason Farlow; Pamala R Coker; Kimothy L Smith; Bingxiang Wang; Leo J Kenefic; Claire M Fraser-Liggett; David M Wagner; Paul Keim
Journal:  PLoS One       Date:  2007-05-23       Impact factor: 3.240

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  110 in total

1.  Interspecies interactions that result in Bacillus subtilis forming biofilms are mediated mainly by members of its own genus.

Authors:  Elizabeth A Shank; Vanja Klepac-Ceraj; Leonardo Collado-Torres; Gordon E Powers; Richard Losick; Roberto Kolter
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-10       Impact factor: 11.205

2.  Whole-genome sequences of Bacillus subtilis and close relatives.

Authors:  Ashlee M Earl; Mark Eppinger; W Florian Fricke; M J Rosovitz; David A Rasko; Sean Daugherty; Richard Losick; Roberto Kolter; Jacques Ravel
Journal:  J Bacteriol       Date:  2012-05       Impact factor: 3.490

3.  Contribution of surfactin and SwrA to flagellin expression, swimming, and surface motility in Bacillus subtilis.

Authors:  Emilia Ghelardi; Sara Salvetti; Mara Ceragioli; Sokhna A Gueye; Francesco Celandroni; Sonia Senesi
Journal:  Appl Environ Microbiol       Date:  2012-07-06       Impact factor: 4.792

4.  Mass spectral molecular networking of living microbial colonies.

Authors:  Jeramie Watrous; Patrick Roach; Theodore Alexandrov; Brandi S Heath; Jane Y Yang; Roland D Kersten; Menno van der Voort; Kit Pogliano; Harald Gross; Jos M Raaijmakers; Bradley S Moore; Julia Laskin; Nuno Bandeira; Pieter C Dorrestein
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-14       Impact factor: 11.205

5.  High salinity alters the germination behavior of Bacillus subtilis spores with nutrient and nonnutrient germinants.

Authors:  Katja Nagler; Peter Setlow; Yong-Qing Li; Ralf Moeller
Journal:  Appl Environ Microbiol       Date:  2013-12-06       Impact factor: 4.792

6.  Disruption of l-Rhamnose Biosynthesis Results in Severe Growth Defects in Streptococcus mutans.

Authors:  Andrew P Bischer; Christopher J Kovacs; Roberta C Faustoferri; Robert G Quivey
Journal:  J Bacteriol       Date:  2020-02-25       Impact factor: 3.490

7.  Rap Protein Paralogs of Bacillus thuringiensis: a Multifunctional and Redundant Regulatory Repertoire for the Control of Collective Functions.

Authors:  Gabriela Gastélum; Mayra de la Torre; Jorge Rocha
Journal:  J Bacteriol       Date:  2020-02-25       Impact factor: 3.490

Review 8.  Multiple and Overlapping Functions of Quorum Sensing Proteins for Cell Specialization in Bacillus Species.

Authors:  Abel Verdugo-Fuentes; Gabriela Gastélum; Jorge Rocha; Mayra de la Torre
Journal:  J Bacteriol       Date:  2020-04-27       Impact factor: 3.490

9.  Not so simple, not so subtle: the interspecies competition between Bacillus simplex and Bacillus subtilis and its impact on the evolution of biofilms.

Authors:  Gili Rosenberg; Nitai Steinberg; Yaara Oppenheimer-Shaanan; Tsvia Olender; Shany Doron; Julius Ben-Ari; Alexandra Sirota-Madi; Zohar Bloom-Ackermann; Ilana Kolodkin-Gal
Journal:  NPJ Biofilms Microbiomes       Date:  2016-01-27       Impact factor: 7.290

10.  Cytoplasmic acidification and the benzoate transcriptome in Bacillus subtilis.

Authors:  Ryan D Kitko; Rebecca L Cleeton; Erin I Armentrout; Grace E Lee; Ken Noguchi; Melanie B Berkmen; Brian D Jones; Joan L Slonczewski
Journal:  PLoS One       Date:  2009-12-14       Impact factor: 3.240

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