Literature DB >> 18444620

Effects of alkaline earth metal ion complexation on amino acid zwitterion stability: results from infrared action spectroscopy.

Matthew F Bush1, Jos Oomens, Richard J Saykally, Evan R Williams.   

Abstract

The structures of isolated alkaline earth metal cationized amino acids are investigated using infrared multiple photon dissociation (IRMPD) spectroscopy and theory. These results indicate that arginine, glutamine, proline, serine, and valine all adopt zwitterionic structures when complexed with divalent barium. The IRMPD spectra for these ions exhibit bands assigned to carboxylate stretching modes, spectral signatures for zwitterionic amino acids, and lack bands attributable to the carbonyl stretch of a carboxylic acid functional group. Structural and spectral assignments are strengthened through comparisons with absorbance spectra calculated for low-energy structures and the IRMPD spectra of analogous ions containing monovalent alkali metals. Many bands are significantly red-shifted from the corresponding bands for amino acids complexed with monovalent metal ions, owing to increased charge transfer to divalent metal ions. The IRMPD spectra of arginine complexed with divalent strontium and barium are very similar and indicate that arginine adopts a zwitterionic form in both ions. Calculations indicate that nonzwitterionic forms of arginine are lowest in free energy in complexes with smaller alkaline earth metal cations and that zwitterionic forms are preferentially stabilized with increasing metal ion size. B3LYP and MP2 calculations indicate that zwitterionic forms of arginine are lowest in free energy for M = Ca, Sr, and Ba.

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Year:  2008        PMID: 18444620     DOI: 10.1021/ja711343q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

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Authors:  Ronghu Wu; Richard A Marta; Jonathan K Martens; Kris R Eldridge; Terry B McMahon
Journal:  J Am Soc Mass Spectrom       Date:  2011-06-22       Impact factor: 3.109

2.  IRPD spectroscopy and ensemble measurements: effects of different data acquisition and analysis methods.

Authors:  James S Prell; Jeremy T O'Brien; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2010-01-25       Impact factor: 3.109

3.  Effect of metal Ions (Ni²⁺, Cu²⁺ and Zn²⁺) and water coordination on the structure of L-phenylalanine, L-tyrosine, L-tryptophan and their zwitterionic forms.

Authors:  Milan Remko; Daniel Fitz; Ria Broer; Bernd Michael Rode
Journal:  J Mol Model       Date:  2011-03-02       Impact factor: 1.810

4.  Dramatically stabilizing multiprotein complex structure in the absence of bulk water using tuned Hofmeister salts.

Authors:  Linjie Han; Suk-Joon Hyung; Brandon T Ruotolo
Journal:  Faraday Discuss       Date:  2013       Impact factor: 4.008

5.  Conformational analysis of glutamic acid: a density functional approach using implicit continuum solvent model.

Authors:  Başak Turan; Cenk Selçuki
Journal:  J Mol Model       Date:  2014-08-19       Impact factor: 1.810

6.  Structure of Protonated Threonine Dimers in the Gas Phase: Salt-Bridged or Charge-Solvated?

Authors:  Hong Yin; Xianglei Kong
Journal:  J Am Soc Mass Spectrom       Date:  2015-06-26       Impact factor: 3.109

7.  A Database of Transition-Metal-Coordinated Peptide Cross-Sections: Selective Interaction with Specific Amino Acid Residues.

Authors:  Jonathan M Dilger; Matthew S Glover; David E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  2017-03-29       Impact factor: 3.109

8.  Reinvestigation of the structure of protonated lysine dimer.

Authors:  Xianglei Kong
Journal:  J Am Soc Mass Spectrom       Date:  2014-01-14       Impact factor: 3.109

9.  An insight into the interaction of L-proline with the transition metal cations Fe(2+), Co(2+), Ni(2+): a gas phase theoretical study.

Authors:  Behzad Khalili
Journal:  J Mol Model       Date:  2015-12-16       Impact factor: 1.810

10.  Infrared Multiple Photon Dissociation Spectroscopy of Cationized Canavanine: Side-Chain Substitution Influences Gas-Phase Zwitterion Formation.

Authors:  Zachary M Smith; Vincent Steinmetz; Jonathan Martens; Jos Oomens; John C Poutsma
Journal:  Int J Mass Spectrom       Date:  2017-09-04       Impact factor: 1.986

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