Literature DB >> 18442490

Transcriptional regulation of human small nuclear RNA genes.

Gauri W Jawdekar1, R William Henry.   

Abstract

The products of human snRNA genes have been frequently described as performing housekeeping functions and their synthesis refractory to regulation. However, recent studies have emphasized that snRNA and other related non-coding RNA molecules control multiple facets of the central dogma, and their regulated expression is critical to cellular homeostasis during normal growth and in response to stress. Human snRNA genes contain compact and yet powerful promoters that are recognized by increasingly well-characterized transcription factors, thus providing a premier model system to study gene regulation. This review summarizes many recent advances deciphering the mechanism by which the transcription of human snRNA and related genes are regulated.

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Year:  2008        PMID： 18442490      PMCID： PMC2684849          DOI： 10.1016/j.bbagrm.2008.04.001

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN： 0006-3002


  175 in total

1.  The Oct-1 POU-specific domain can stimulate small nuclear RNA gene transcription by stabilizing the basal transcription complex SNAPc.

Authors:  V Mittal; M A Cleary; W Herr; N Hernandez
Journal:  Mol Cell Biol       Date:  1996-05       Impact factor: 4.272

2.  Human genes for U2 small nuclear RNA map to a major adenovirus 12 modification site on chromosome 17.

Authors:  V Lindgren; M Ares; A M Weiner; U Francke
Journal:  Nature       Date:  1985 Mar 7-13       Impact factor: 49.962

3.  Cell cycle regulation of RNA polymerase III transcription.

Authors:  R J White; T M Gottlieb; C S Downes; S P Jackson
Journal:  Mol Cell Biol       Date:  1995-12       Impact factor: 4.272

4.  True genes for human U1 small nuclear RNA. Copy number, polymorphism, and methylation.

Authors:  E Lund; J E Dahlberg
Journal:  J Biol Chem       Date:  1984-02-10       Impact factor: 5.157

5.  Changing the RNA polymerase specificity of U snRNA gene promoters.

Authors:  I W Mattaj; N A Dathan; H D Parry; P Carbon; A Krol
Journal:  Cell       Date:  1988-11-04       Impact factor: 41.582

6.  Adenovirus type 12-induced fragility of the human RNU2 locus requires U2 small nuclear RNA transcriptional regulatory elements.

Authors:  A D Bailey; Z Li; T Pavelitz; A M Weiner
Journal:  Mol Cell Biol       Date:  1995-11       Impact factor: 4.272

7.  The transcriptionally competent U2 gene is necessary and sufficient for adenovirus type 12 induction of the fragile site at 17q21-22.

Authors:  S Gargano; P Wang; E Rusanganwa; S Bacchetti
Journal:  Mol Cell Biol       Date:  1995-11       Impact factor: 4.272

8.  Human genes for U2 small nuclear RNA are tandemly repeated.

Authors:  S W Van Arsdell; A M Weiner
Journal:  Mol Cell Biol       Date:  1984-03       Impact factor: 4.272

9.  Formation of the 3' end of U1 snRNA is directed by a conserved sequence located downstream of the coding region.

Authors:  N Hernandez
Journal:  EMBO J       Date:  1985-07       Impact factor: 11.598

10.  Human U2 and U1 RNA genes use similar transcription signals.

Authors:  G Westin; E Lund; J T Murphy; U Pettersson; J E Dahlberg
Journal:  EMBO J       Date:  1984-12-20       Impact factor: 11.598
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  47 in total

1.  ATAC and Mediator coactivators form a stable complex and regulate a set of non-coding RNA genes.

Authors:  Arnaud R Krebs; Jeroen Demmers; Krishanpal Karmodiya; Nan-Chi Chang; Alice Chien Chang; László Tora
Journal:  EMBO Rep       Date:  2010-05-28       Impact factor: 8.807

2.  Negative regulation of human U6 snRNA promoter by p38 kinase through Oct-1.

Authors:  Bor-Ruei Lin; Ven Natarajan
Journal:  Gene       Date:  2012-01-28       Impact factor: 3.688

3.  Chromatin structure is implicated in "late" elongation checkpoints on the U2 snRNA and beta-actin genes.

Authors:  Sylvain Egloff; Hadeel Al-Rawaf; Dawn O'Reilly; Shona Murphy
Journal:  Mol Cell Biol       Date:  2009-05-18       Impact factor: 4.272

4.  Genome-wide evolutionary analysis of the noncoding RNA genes and noncoding DNA of Paramecium tetraurelia.

Authors:  Chun-Long Chen; Hui Zhou; Jian-You Liao; Liang-Hu Qu; Laurence Amar
Journal:  RNA       Date:  2009-02-13       Impact factor: 4.942

5.  Identification of SNAPc subunit domains that interact with specific nucleotide positions in the U1 and U6 gene promoters.

Authors:  Mun Kyoung Kim; Yoon Soon Kang; Hsien-Tsung Lai; Nermeen H Barakat; Deodato Magante; William E Stumph
Journal:  Mol Cell Biol       Date:  2010-03-08       Impact factor: 4.272

6.  FTO controls reversible m6Am RNA methylation during snRNA biogenesis.

Authors:  Jan Mauer; Miriam Sindelar; Vladimir Despic; Théo Guez; Ben R Hawley; Jean-Jacques Vasseur; Andrea Rentmeister; Steven S Gross; Livio Pellizzoni; Françoise Debart; Hani Goodarzi; Samie R Jaffrey
Journal:  Nat Chem Biol       Date:  2019-02-18       Impact factor: 15.040

Review 7.  Transcriptional regulation of snRNAs and its significance for plant development.

Authors:  Misato Ohtani
Journal:  J Plant Res       Date:  2016-11-29       Impact factor: 2.629

8.  Mediator Is Essential for Small Nuclear and Nucleolar RNA Transcription in Yeast.

Authors:  Jason P Tourigny; Moustafa M Saleh; Kenny Schumacher; Didier Devys; Gabriel E Zentner
Journal:  Mol Cell Biol       Date:  2018-11-28       Impact factor: 4.272

Review 9.  RNA polymerase III repression by the retinoblastoma tumor suppressor protein.

Authors:  Alison Gjidoda; R William Henry
Journal:  Biochim Biophys Acta       Date:  2012-10-12

10.  tRNASec is transcribed by RNA polymerase II in Trypanosoma brucei but not in humans.

Authors:  Eric Aeby; Elisabetta Ullu; Hasmik Yepiskoposyan; Bernd Schimanski; Isabel Roditi; Oliver Mühlemann; André Schneider
Journal:  Nucleic Acids Res       Date:  2010-05-05       Impact factor: 16.971
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