Literature DB >> 18439552

Polymorphisms of the HNF1A gene encoding hepatocyte nuclear factor-1 alpha are associated with C-reactive protein.

Alexander P Reiner1, Mathew J Barber, Yongtao Guan, Paul M Ridker, Leslie A Lange, Daniel I Chasman, Jeremy D Walston, Gregory M Cooper, Nancy S Jenny, Mark J Rieder, J Peter Durda, Joshua D Smith, John Novembre, Russell P Tracy, Jerome I Rotter, Matthew Stephens, Deborah A Nickerson, Ronald M Krauss.   

Abstract

Data from the Pharmacogenomics and Risk of Cardiovascular Disease (PARC) study and the Cardiovascular Health Study (CHS) provide independent and confirmatory evidence for association between common polymorphisms of the HNF1A gene encoding hepatocyte nuclear factor-1 alpha and plasma C-reactive protein (CRP) concentration. Analyses with the use of imputation-based methods to combine genotype data from both studies and to test untyped SNPs from the HapMap database identified several SNPs within a 5 kb region of HNF1A intron 1 with the strongest evidence of association with CRP phenotype.

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Year:  2008        PMID: 18439552      PMCID: PMC2427318          DOI: 10.1016/j.ajhg.2008.03.017

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  26 in total

1.  Score tests for association between traits and haplotypes when linkage phase is ambiguous.

Authors:  Daniel J Schaid; Charles M Rowland; David E Tines; Robert M Jacobson; Gregory A Poland
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2.  Effect of statin therapy on C-reactive protein levels: the pravastatin inflammation/CRP evaluation (PRINCE): a randomized trial and cohort study.

Authors:  M A Albert; E Danielson; N Rifai; P M Ridker
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3.  Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium.

Authors:  Christopher S Carlson; Michael A Eberle; Mark J Rieder; Qian Yi; Leonid Kruglyak; Deborah A Nickerson
Journal:  Am J Hum Genet       Date:  2003-12-15       Impact factor: 11.025

4.  Evaluation of nine automated high-sensitivity C-reactive protein methods: implications for clinical and epidemiological applications. Part 2.

Authors:  W L Roberts; L Moulton; T C Law; G Farrow; M Cooper-Anderson; J Savory; N Rifai
Journal:  Clin Chem       Date:  2001-03       Impact factor: 8.327

5.  Familial and genetic determinants of systemic markers of inflammation: the NHLBI family heart study.

Authors:  J S Pankow; A R Folsom; M Cushman; I B Borecki; P N Hopkins; J H Eckfeldt; R P Tracy
Journal:  Atherosclerosis       Date:  2001-02-15       Impact factor: 5.162

6.  Loci related to metabolic-syndrome pathways including LEPR,HNF1A, IL6R, and GCKR associate with plasma C-reactive protein: the Women's Genome Health Study.

Authors:  Paul M Ridker; Guillaume Pare; Alex Parker; Robert Y L Zee; Jacqueline S Danik; Julie E Buring; David Kwiatkowski; Nancy R Cook; Joseph P Miletich; Daniel I Chasman
Journal:  Am J Hum Genet       Date:  2008-04-24       Impact factor: 11.025

7.  Heritability of C-reactive protein and association with apolipoprotein E genotypes in Japanese Americans.

Authors:  M A Austin; C Zhang; S E Humphries; W L Chandler; P J Talmud; K L Edwards; D L Leonetti; M J McNeely; W Y Fujimoto
Journal:  Ann Hum Genet       Date:  2004-05       Impact factor: 1.670

Review 8.  C-reactive protein gene polymorphisms, C-reactive protein blood levels, and cardiovascular disease risk.

Authors:  Fadi G Hage; Alexander J Szalai
Journal:  J Am Coll Cardiol       Date:  2007-09-04       Impact factor: 24.094

9.  Transcription factor c-Rel enhances C-reactive protein expression by facilitating the binding of C/EBPbeta to the promoter.

Authors:  Alok Agrawal; David Samols; Irving Kushner
Journal:  Mol Immunol       Date:  2003-10       Impact factor: 4.407

10.  Imputation-based analysis of association studies: candidate regions and quantitative traits.

Authors:  Bertrand Servin; Matthew Stephens
Journal:  PLoS Genet       Date:  2007-05-30       Impact factor: 5.917

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  94 in total

1.  Single-nucleotide polymorphisms at five loci are associated with C-reactive protein levels in a cohort of Filipino young adults.

Authors:  Ghenadie Curocichin; Ying Wu; Thomas W McDade; Christopher W Kuzawa; Judith B Borja; Li Qin; Ethan M Lange; Linda S Adair; Leslie A Lange; Karen L Mohlke
Journal:  J Hum Genet       Date:  2011-09-22       Impact factor: 3.172

2.  Power and instrument strength requirements for Mendelian randomization studies using multiple genetic variants.

Authors:  Brandon L Pierce; Habibul Ahsan; Tyler J Vanderweele
Journal:  Int J Epidemiol       Date:  2010-09-02       Impact factor: 7.196

3.  Mapping of numerous disease-associated expression polymorphisms in primary peripheral blood CD4+ lymphocytes.

Authors:  Amy Murphy; Jen-Hwa Chu; Mousheng Xu; Vincent J Carey; Ross Lazarus; Andy Liu; Stanley J Szefler; Robert Strunk; Karen Demuth; Mario Castro; Nadia N Hansel; Gregory B Diette; Becky M Vonakis; N Franklin Adkinson; Barbara J Klanderman; Jody Senter-Sylvia; John Ziniti; Christoph Lange; Tomi Pastinen; Benjamin A Raby
Journal:  Hum Mol Genet       Date:  2010-09-10       Impact factor: 6.150

4.  Genome-wide "pleiotropy scan" identifies HNF1A region as a novel pancreatic cancer susceptibility locus.

Authors:  Brandon L Pierce; Habibul Ahsan
Journal:  Cancer Res       Date:  2011-04-15       Impact factor: 12.701

Review 5.  The genetics of type 2 diabetes: what have we learned from GWAS?

Authors:  Liana K Billings; Jose C Florez
Journal:  Ann N Y Acad Sci       Date:  2010-11       Impact factor: 5.691

6.  Metabolic and cardiovascular traits: an abundance of recently identified common genetic variants.

Authors:  Karen L Mohlke; Michael Boehnke; Gonçalo R Abecasis
Journal:  Hum Mol Genet       Date:  2008-10-15       Impact factor: 6.150

Review 7.  Bringing genome-wide association findings into clinical use.

Authors:  Teri A Manolio
Journal:  Nat Rev Genet       Date:  2013-07-09       Impact factor: 53.242

8.  Loci affecting gamma-glutamyl transferase in adults and adolescents show age × SNP interaction and cardiometabolic disease associations.

Authors:  Rita P Middelberg; Beben Benyamin; Marleen H M de Moor; Nicole M Warrington; Scott Gordon; Anjali K Henders; Sarah E Medland; Dale R Nyholt; Eco J C de Geus; Jouke J Hottenga; Gonneke Willemsen; Lawrence J Beilin; Trevor A Mori; Margaret J Wright; Andrew C Heath; Pamela A F Madden; Dorret I Boomsma; Craig E Pennell; Grant W Montgomery; Nicholas G Martin; John B Whitfield
Journal:  Hum Mol Genet       Date:  2011-10-18       Impact factor: 6.150

Review 9.  Bayesian statistical methods for genetic association studies.

Authors:  Matthew Stephens; David J Balding
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Review 10.  Genetic mapping in human disease.

Authors:  David Altshuler; Mark J Daly; Eric S Lander
Journal:  Science       Date:  2008-11-07       Impact factor: 47.728

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