Literature DB >> 18436779

The epigenetic landscape of plants.

Xiaoyu Zhang1.   

Abstract

In plants, DNA methylation, histone modifications, and RNA interference play critically important roles in regulating chromatin structure, thereby profoundly affecting transcription and other molecular events. Recent advances in microarray and high-throughput sequencing technologies have enabled genome-wide studies of these pathways in great detail. The vast amounts of "epigenomic" data generated so far have provided new insights into the mechanisms and functions of these pathways and have broadened our understanding of the structure and organization of plant chromatin as a whole.

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Year:  2008        PMID： 18436779     DOI： 10.1126/science.1153996

Source DB:  PubMed          Journal:  Science        ISSN： 0036-8075            Impact factor:   47.728


  82 in total

1.  Tissue-specific differences in cytosine methylation and their association with differential gene expression in sorghum.

Authors:  Meishan Zhang; Chunming Xu; Diter von Wettstein; Bao Liu
Journal:  Plant Physiol       Date:  2011-06-01       Impact factor: 8.340

Review 2.  Genomic basis for light control of plant development.

Authors:  Jigang Li; William Terzaghi; Xing Wang Deng
Journal:  Protein Cell       Date:  2012-03-17       Impact factor: 14.870

Review 3.  Exploring giant plant genomes with next-generation sequencing technology.

Authors:  Laura J Kelly; Ilia J Leitch
Journal:  Chromosome Res       Date:  2011-10       Impact factor: 5.239

4.  Chromatin modification acts as a memory for systemic acquired resistance in the plant stress response.

Authors:  Michal Jaskiewicz; Uwe Conrath; Christoph Peterhänsel
Journal:  EMBO Rep       Date:  2010-12-03       Impact factor: 8.807

5.  Quantitative trait loci, epigenetics, sugars, and microRNAs: quaternaries in phosphate acquisition and use.

Authors:  Carroll P Vance
Journal:  Plant Physiol       Date:  2010-10       Impact factor: 8.340

6.  Epigenetic silencing of transposable elements: a trade-off between reduced transposition and deleterious effects on neighboring gene expression.

Authors:  Jesse D Hollister; Brandon S Gaut
Journal:  Genome Res       Date:  2009-05-28       Impact factor: 9.043

7.  Computational and analytical framework for small RNA profiling by high-throughput sequencing.

Authors:  Noah Fahlgren; Christopher M Sullivan; Kristin D Kasschau; Elisabeth J Chapman; Jason S Cumbie; Taiowa A Montgomery; Sunny D Gilbert; Mark Dasenko; Tyler W H Backman; Scott A Givan; James C Carrington
Journal:  RNA       Date:  2009-03-23       Impact factor: 4.942

Review 8.  Integrated genomics and molecular breeding approaches for dissecting the complex quantitative traits in crop plants.

Authors:  Alice Kujur; Maneesha S Saxena; Deepak Bajaj; Swarup K Parida
Journal:  J Biosci       Date:  2013-12       Impact factor: 1.826

Review 9.  Gene expression analysis, proteomics, and network discovery.

Authors:  Sacha Baginsky; Lars Hennig; Philip Zimmermann; Wilhelm Gruissem
Journal:  Plant Physiol       Date:  2009-12-11       Impact factor: 8.340

10.  Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice.

Authors:  Liya Wei; Lianfeng Gu; Xianwei Song; Xiekui Cui; Zhike Lu; Ming Zhou; Lulu Wang; Fengyi Hu; Jixian Zhai; Blake C Meyers; Xiaofeng Cao
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-19       Impact factor: 11.205
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