Literature DB >> 18433454

Evolution of a new enzyme activity from the same motif fold.

Petr G Leiman1, Ian J Molineux.   

Abstract

The host cell recognition protein of the Escherichia coli bacteriophage HK620 is a large homotrimeric tailspike that cleaves the O18A1 type O antigen. The crystal structure of HK620 tailspike determined in the apo and substrate-bound form is reported by Barbirz et al. in this issue of Molecular Microbiology. Lacking detectable sequence similarity, the fold and overall organization of the HK620 tailspike are similar to those of the tailspikes of the related phages P22 and Sf6. The substrate-binding site is intrasubunit in P22 and HK620 tailspikes, but intersubunit in Sf6, demonstrating how phages can adapt the same protein fold to recognize different substrates.

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Year:  2008        PMID: 18433454      PMCID: PMC2574927          DOI: 10.1111/j.1365-2958.2008.06241.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  10 in total

1.  The structure of an infectious P22 virion shows the signal for headful DNA packaging.

Authors:  Gabriel C Lander; Liang Tang; Sherwood R Casjens; Eddie B Gilcrease; Peter Prevelige; Anton Poliakov; Clinton S Potter; Bridget Carragher; John E Johnson
Journal:  Science       Date:  2006-05-18       Impact factor: 47.728

2.  Evolution of bacteriophages infecting encapsulated bacteria: lessons from Escherichia coli K1-specific phages.

Authors:  Katharina Stummeyer; David Schwarzer; Heike Claus; Ulrich Vogel; Rita Gerardy-Schahn; Martina Mühlenhoff
Journal:  Mol Microbiol       Date:  2006-06       Impact factor: 3.501

3.  Structure of the receptor-binding protein of bacteriophage det7: a podoviral tail spike in a myovirus.

Authors:  Monika Walter; Christian Fiedler; Renate Grassl; Manfred Biebl; Reinhard Rachel; X Lois Hermo-Parrado; Antonio L Llamas-Saiz; Robert Seckler; Stefan Miller; Mark J van Raaij
Journal:  J Virol       Date:  2007-12-12       Impact factor: 5.103

4.  New domain motif: the structure of pectate lyase C, a secreted plant virulence factor.

Authors:  M D Yoder; N T Keen; F Jurnak
Journal:  Science       Date:  1993-06-04       Impact factor: 47.728

5.  Comparative study of host capsule depolymerases associated with Klebsiella bacteriophages.

Authors:  D Rieger-Hug; S Stirm
Journal:  Virology       Date:  1981-08       Impact factor: 3.616

6.  Crystal structure of phage P22 tailspike protein complexed with Salmonella sp. O-antigen receptors.

Authors:  S Steinbacher; U Baxa; S Miller; A Weintraub; R Seckler; R Huber
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-01       Impact factor: 11.205

7.  The chromosome of Shigella flexneri bacteriophage Sf6: complete nucleotide sequence, genetic mosaicism, and DNA packaging.

Authors:  Sherwood Casjens; Danella A Winn-Stapley; Eddie B Gilcrease; Renato Morona; Christiane Kühlewein; James E H Chua; Paul A Manning; William Inwood; Alvin J Clark
Journal:  J Mol Biol       Date:  2004-05-28       Impact factor: 5.469

8.  Crystal structure of Escherichia coli phage HK620 tailspike: podoviral tailspike endoglycosidase modules are evolutionarily related.

Authors:  Stefanie Barbirz; Jürgen J Müller; Charlotte Uetrecht; Alvin J Clark; Udo Heinemann; Robert Seckler
Journal:  Mol Microbiol       Date:  2008-07       Impact factor: 3.501

9.  An intersubunit active site between supercoiled parallel beta helices in the trimeric tailspike endorhamnosidase of Shigella flexneri Phage Sf6.

Authors:  Jürgen J Müller; Stefanie Barbirz; Karolin Heinle; Alexander Freiberg; Robert Seckler; Udo Heinemann
Journal:  Structure       Date:  2008-05       Impact factor: 5.006

10.  The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificities.

Authors:  Petr G Leiman; Anthony J Battisti; Valorie D Bowman; Katharina Stummeyer; Martina Mühlenhoff; Rita Gerardy-Schahn; Dean Scholl; Ian J Molineux
Journal:  J Mol Biol       Date:  2007-06-02       Impact factor: 5.469

  10 in total
  25 in total

Review 1.  A common evolutionary origin for tailed-bacteriophage functional modules and bacterial machineries.

Authors:  David Veesler; Christian Cambillau
Journal:  Microbiol Mol Biol Rev       Date:  2011-09       Impact factor: 11.056

2.  A multivalent adsorption apparatus explains the broad host range of phage phi92: a comprehensive genomic and structural analysis.

Authors:  David Schwarzer; Falk F R Buettner; Christopher Browning; Sergey Nazarov; Wolfgang Rabsch; Andrea Bethe; Astrid Oberbeck; Valorie D Bowman; Katharina Stummeyer; Martina Mühlenhoff; Petr G Leiman; Rita Gerardy-Schahn
Journal:  J Virol       Date:  2012-07-11       Impact factor: 5.103

3.  Proteomic analysis revealed the biofilm-degradation abilities of the bacteriophage UPMK_1 and UPMK_2 against Methicillin-resistant Staphylococcus aureus.

Authors:  Khulood Hamid Dakheel; Raha Abdul Rahim; Jameel R Al-Obaidi; Vasantha Kumari Neela; Tan Geok Hun; Mohd Noor Mat Isa; Nurhanani Razali; Khatijah Yusoff
Journal:  Biotechnol Lett       Date:  2022-02-05       Impact factor: 2.461

4.  A tale of tails: Sialidase is key to success in a model of phage therapy against K1-capsulated Escherichia coli.

Authors:  J J Bull; E R Vimr; I J Molineux
Journal:  Virology       Date:  2009-12-16       Impact factor: 3.616

5.  Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike.

Authors:  Ye Xiang; Petr G Leiman; Long Li; Shelley Grimes; Dwight L Anderson; Michael G Rossmann
Journal:  Mol Cell       Date:  2009-05-15       Impact factor: 17.970

6.  Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016).

Authors:  Andriy Kryshtafovych; Reinhard Albrecht; Arnaud Baslé; Pedro Bule; Alessandro T Caputo; Ana Luisa Carvalho; Kinlin L Chao; Ron Diskin; Krzysztof Fidelis; Carlos M G A Fontes; Folmer Fredslund; Harry J Gilbert; Celia W Goulding; Marcus D Hartmann; Christopher S Hayes; Osnat Herzberg; Johan C Hill; Andrzej Joachimiak; Gert-Wieland Kohring; Roman I Koning; Leila Lo Leggio; Marco Mangiagalli; Karolina Michalska; John Moult; Shabir Najmudin; Marco Nardini; Valentina Nardone; Didier Ndeh; Thanh-Hong Nguyen; Guido Pintacuda; Sandra Postel; Mark J van Raaij; Pietro Roversi; Amir Shimon; Abhimanyu K Singh; Eric J Sundberg; Kaspars Tars; Nicole Zitzmann; Torsten Schwede
Journal:  Proteins       Date:  2017-10-16

7.  Engineering the Modular Receptor-Binding Proteins of Klebsiella Phages Switches Their Capsule Serotype Specificity.

Authors:  Agnieszka Latka; Sebastien Lemire; Dennis Grimon; Dorien Dams; Barbara Maciejewska; Timothy Lu; Zuzanna Drulis-Kawa; Yves Briers
Journal:  mBio       Date:  2021-05-04       Impact factor: 7.867

Review 8.  Morphogenesis of the T4 tail and tail fibers.

Authors:  Petr G Leiman; Fumio Arisaka; Mark J van Raaij; Victor A Kostyuchenko; Anastasia A Aksyuk; Shuji Kanamaru; Michael G Rossmann
Journal:  Virol J       Date:  2010-12-03       Impact factor: 4.099

9.  Crystal structure of ORF210 from E. coli O157:H1 phage CBA120 (TSP1), a putative tailspike protein.

Authors:  Chen Chen; Patrick Bales; Julia Greenfield; Ryan D Heselpoth; Daniel C Nelson; Osnat Herzberg
Journal:  PLoS One       Date:  2014-03-26       Impact factor: 3.240

10.  The complete genome sequence of EC1-UPM, a novel N4-like bacteriophage that infects Escherichia coli O78:K80.

Authors:  Han Ming Gan; Chin Chin Sieo; Shirley Gee Hoon Tang; Abdul Rahman Omar; Yin Wan Ho
Journal:  Virol J       Date:  2013-10-18       Impact factor: 4.099

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