Literature DB >> 18430452

Cloning, expression, purification, cofactor requirements, and steady state kinetics of phosphoketolase-2 from Lactobacillus plantarum.

Alejandro Yevenes1, Perry A Frey.   

Abstract

The genes xpk1 and xpk2(Delta1-21) encoding phosphoketolase-1 and (Delta1-7)-truncated phosphoketolase-2 have been cloned from Lactobacillus plantarum and expressed in Escherichia coli. Both gene-products display phosphoketolase activity on fructose-6-phosphate in extracts. A N-terminal His-tag construct of xpk2(Delta1-21) was also expressed in E. coli and produced active His-tagged (Delta1-7)-truncated phosphoketolase-2 (hereafter phosphoketolase-2). Phosphoketolase-2 is activated by thiamine pyrophosphate (TPP) and the divalent metal ions Mg(2+), Mn(2+), or Ca(2+). Kinetic analysis and data from the literature indicate the activators are MgTPP, MnTPP, or CaTPP, and these species activate by an ordered equilibrium binding pathway, with Me(2+)TPP binding first and then fructose-6-phosphate. Phosphoketolase-2 accepts either fructose-6-phosphate or xylulose-5-phosphate as substrates, together with inorganic phosphate, to produce acetyl phosphate and either erythrose-4-phosphate or glyceraldehyde-3-phosphate, respectively. Steady state kinetic analysis of acetyl phosphate formation with either substrate indicates a ping pong kinetic mechanism. Product inhibition patterns with erythrose-4-phosphate indicate that an intermediate in the ping pong mechanism is formed irreversibly. Background mechanistic information indicates that this intermediate is 2-acetyl-TPP. The irreversibility of 2-acetyl-TPP formation might explain the overall irreversibility of the reaction of phosphoketolase-2.

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Year:  2008        PMID: 18430452     DOI: 10.1016/j.bioorg.2008.03.002

Source DB:  PubMed          Journal:  Bioorg Chem        ISSN: 0045-2068            Impact factor:   5.275


  12 in total

1.  Overexpression, crystallization and preliminary X-ray analysis of xylulose-5-phosphate/fructose-6-phosphate phosphoketolase from Bifidobacterium breve.

Authors:  Ryuichiro Suzuki; Byung-Jun Kim; Tsuyoshi Shibata; Yuki Iwamoto; Takane Katayama; Hisashi Ashida; Takayoshi Wakagi; Hirofumi Shoun; Shinya Fushinobu; Kenji Yamamoto
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-07-29

2.  Preliminary X-ray crystallographic analysis of the D-xylulose 5-phosphate phosphoketolase from Lactococcus lactis.

Authors:  Georgiana Petrareanu; Mihaela C Balasu; Ulrich Zander; Axel J Scheidig; Stefan E Szedlacsek
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-06-24

3.  Biochemical and kinetic characterization of xylulose 5-phosphate/fructose 6-phosphate phosphoketolase 2 (Xfp2) from Cryptococcus neoformans.

Authors:  Katie Glenn; Cheryl Ingram-Smith; Kerry S Smith
Journal:  Eukaryot Cell       Date:  2014-03-21

4.  Crystal structures of phosphoketolase: thiamine diphosphate-dependent dehydration mechanism.

Authors:  Ryuichiro Suzuki; Takane Katayama; Byung-Jun Kim; Takayoshi Wakagi; Hirofumi Shoun; Hisashi Ashida; Kenji Yamamoto; Shinya Fushinobu
Journal:  J Biol Chem       Date:  2010-08-24       Impact factor: 5.157

5.  Allosteric regulation of Lactobacillus plantarum xylulose 5-phosphate/fructose 6-phosphate phosphoketolase (Xfp).

Authors:  Katie Glenn; Kerry S Smith
Journal:  J Bacteriol       Date:  2015-01-20       Impact factor: 3.490

6.  Phosphoketolase pathway for xylose catabolism in Clostridium acetobutylicum revealed by 13C metabolic flux analysis.

Authors:  Lixia Liu; Lei Zhang; Wei Tang; Yang Gu; Qiang Hua; Sheng Yang; Weihong Jiang; Chen Yang
Journal:  J Bacteriol       Date:  2012-08-03       Impact factor: 3.490

7.  Utilization of D-ribitol by Lactobacillus casei BL23 requires a mannose-type phosphotransferase system and three catabolic enzymes.

Authors:  A Bourand; M J Yebra; G Boël; A Mazé; J Deutscher
Journal:  J Bacteriol       Date:  2013-04-05       Impact factor: 3.490

8.  Functional expression and evaluation of heterologous phosphoketolases in Saccharomyces cerevisiae.

Authors:  Alexandra Bergman; Verena Siewers; Jens Nielsen; Yun Chen
Journal:  AMB Express       Date:  2016-11-15       Impact factor: 3.298

9.  Novel molecular, structural and evolutionary characteristics of the phosphoketolases from bifidobacteria and Coriobacteriales.

Authors:  Radhey S Gupta; Anish Nanda; Bijendra Khadka
Journal:  PLoS One       Date:  2017-02-17       Impact factor: 3.240

10.  Mechanistic Studies of 1-Deoxy-D-Xylulose-5-Phosphate Synthase from Deinococcus radiodurans.

Authors:  Sumit Handa; Daniel R Dempsey; Divya Ramamoorthy; Nanci Cook; Wayne C Guida; Tyler J Spradling; Justin K White; H Lee Woodcock; David J Merkler
Journal:  Biochem Mol Biol J       Date:  2018-01-29
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