Literature DB >> 18426773

Combining experiments and modelling to understand size regulation in Dictyostelium discoideum.

Wonhee Jang1, Richard H Gomer.   

Abstract

Little is known about how the sizes of specific organs and tissues are regulated. To try to understand these mechanisms, we have been using a combination of modelling and experiments to study the simple system Dictyostelium discoideum, which forms approximately 20000 cell groups. We found that cells secrete a factor, and as the number of cells increases, the concentration of the factor increases. Diffusion calculations indicated that this lets cells sense the local cell density. Computer simulations predicted, and experiments then showed, that this factor decreases cell-cell adhesion and increases random cell motility. In a group, adhesion forces keep cells together, while random motility forces cause cells to pull apart and separate from each other. As the group size increases above a threshold, the factor concentration goes above a threshold and the cells switch from an adhered state to a separated state. This causes excessively large groups to break apart and/or dissipate, creating an upper limit to group size. In this review, we focus on how computer simulations made testable predictions that led the way to understanding the size regulation mechanism mediated by this factor.

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Year:  2008        PMID: 18426773      PMCID: PMC2504339          DOI: 10.1098/rsif.2008.0067.focus

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  73 in total

1.  A density-sensing factor controls development in Dictyostelium.

Authors:  R Jain; I S Yuen; C R Taphouse; R H Gomer
Journal:  Genes Dev       Date:  1992-03       Impact factor: 11.361

2.  Exposure of cells to a cell number-counting factor decreases the activity of glucose-6-phosphatase to decrease intracellular glucose levels in Dictyostelium discoideum.

Authors:  Wonhee Jang; Richard H Gomer
Journal:  Eukaryot Cell       Date:  2005-01

Review 3.  Integration of signaling information in controlling cell-fate decisions in Dictyostelium.

Authors:  R A Firtel
Journal:  Genes Dev       Date:  1995-06-15       Impact factor: 11.361

4.  Regulation of expression of the cyclic nucleotide phosphodiesterase gene in phosphodiesterase inhibitor-negative mutants of Dictyostelium discoideum.

Authors:  N R Adames; M B Coukell; L Wu
Journal:  Biochem Cell Biol       Date:  1994 May-Jun       Impact factor: 3.626

5.  A developmentally regulated cell surface receptor for a density-sensing factor in Dictyostelium.

Authors:  R Jain; R H Gomer
Journal:  J Biol Chem       Date:  1994-03-25       Impact factor: 5.157

6.  Cell density-sensing in Dictyostelium by means of the accumulation rate, diffusion coefficient and activity threshold of a protein secreted by starved cells.

Authors:  I S Yuen; R H Gomer
Journal:  J Theor Biol       Date:  1994-04-07       Impact factor: 2.691

7.  Calcium uptake and gp80 messenger RNA destabilization follows cAMP receptor down regulation in Dictyostelium discoideum.

Authors:  G M Souza; C Klein; J C Maia; A M Da Silva
Journal:  Cell Signal       Date:  1994-11       Impact factor: 4.315

Review 8.  Cadherins in cancer: implications for invasion and metastasis.

Authors:  M Takeichi
Journal:  Curr Opin Cell Biol       Date:  1993-10       Impact factor: 8.382

9.  Targeted disruption of the ABP-120 gene leads to cells with altered motility.

Authors:  D Cox; J Condeelis; D Wessels; D Soll; H Kern; D A Knecht
Journal:  J Cell Biol       Date:  1992-02       Impact factor: 10.539

10.  A density-sensing factor regulates signal transduction in Dictyostelium.

Authors:  I S Yuen; R Jain; J D Bishop; D F Lindsey; W J Deery; P J Van Haastert; R H Gomer
Journal:  J Cell Biol       Date:  1995-06       Impact factor: 10.539

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  12 in total

1.  Biological switches and clocks.

Authors:  John J Tyson; Reka Albert; Albert Goldbeter; Peter Ruoff; Jill Sible
Journal:  J R Soc Interface       Date:  2008-08-06       Impact factor: 4.118

2.  A cell number counting factor alters cell metabolism.

Authors:  Wonhee Jang; Owen G Schwartz; Richard H Gomer
Journal:  Commun Integr Biol       Date:  2009-07

3.  Response of Dictyostelium discoideum to UV-C and involvement of poly (ADP-ribose) polymerase.

Authors:  H Mir; T Alex; J Rajawat; A Kadam; R Begum
Journal:  Cell Prolif       Date:  2015-04-08       Impact factor: 6.831

4.  Absence of catalytic domain in a putative protein kinase C (PkcA) suppresses tip dominance in Dictyostelium discoideum.

Authors:  Wasima Mohamed; Sibnath Ray; Derrick Brazill; Ramamurthy Baskar
Journal:  Dev Biol       Date:  2015-07-13       Impact factor: 3.582

5.  Cell polarity: netrin calms an excitable system.

Authors:  Allison W McClure; Daniel J Lew
Journal:  Curr Biol       Date:  2014-11-03       Impact factor: 10.834

Review 6.  Cell density sensing and size determination.

Authors:  Richard H Gomer; Wonhee Jang; Derrick Brazill
Journal:  Dev Growth Differ       Date:  2011-04-27       Impact factor: 2.053

7.  A cAMP signaling model explains the benefit of maintaining two forms of phosphodiesterase in Dictyostelium.

Authors:  Eiríkur Pálsson
Journal:  Biophys J       Date:  2009-11-04       Impact factor: 4.033

Review 8.  Cell signaling during development of Dictyostelium.

Authors:  William F Loomis
Journal:  Dev Biol       Date:  2014-04-12       Impact factor: 3.582

9.  Protease activated-receptor 2 is necessary for neutrophil chemorepulsion induced by trypsin, tryptase, or dipeptidyl peptidase IV.

Authors:  Michael J V White; Luis E Chinea; Darrell Pilling; Richard H Gomer
Journal:  J Leukoc Biol       Date:  2017-12-11       Impact factor: 4.962

10.  Regulation of aggregate size and pattern by adenosine and caffeine in cellular slime molds.

Authors:  Pundrik Jaiswal; Thierry Soldati; Sascha Thewes; Ramamurthy Baskar
Journal:  BMC Dev Biol       Date:  2012-01-23       Impact factor: 1.978

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