Literature DB >> 18420963

Mapping of a novel susceptibility locus suggests a role for MC3R and CTSZ in human tuberculosis.

Graham S Cooke1, Sarah J Campbell, Steve Bennett, Christian Lienhardt, Keith P W J McAdam, Giorgio Sirugo, Oumou Sow, Per Gustafson, Frank Mwangulu, Paul van Helden, Paul Fine, Eileen G Hoal, Adrian V S Hill.   

Abstract

RATIONALE: Tuberculosis remains a major cause of morbidity and mortality in the developing world. A better understanding of the mechanisms of disease protection could allow novel strategies to disease management and control.
OBJECTIVES: To identify human genomic loci with evidence of linkage to tuberculosis susceptibility and, within these loci, to identify individual genes influencing tuberculosis susceptibility.
METHODS: Affected sibling pair analysis in South African and Malawian populations. Independent case-control study in West Africa.
MEASUREMENTS AND MAIN RESULTS: Two novel putative loci for tuberculosis susceptibility are identified: chromosome 6p21-q23 and chromosome 20q13.31-33--the latter with the strongest evidence for any locus reported to date in human tuberculosis (single point LOD score of 3.1, P = 10(-4), with a maximum likelihood score [MLS] of 2.8). An independent, multistage genetic association study in West African populations mapped this latter region in detail, finding evidence that variation in the melanocortin 3 receptor (MC3R) and cathepsin Z (CTSZ) genes play a role in the pathogenesis of tuberculosis.
CONCLUSIONS: These results demonstrate how a genomewide approach to the complex phenotype of human tuberculosis can identify novel targets for further research.

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Year:  2008        PMID: 18420963      PMCID: PMC2643210          DOI: 10.1164/rccm.200710-1554OC

Source DB:  PubMed          Journal:  Am J Respir Crit Care Med        ISSN: 1073-449X            Impact factor:   21.405


  40 in total

1.  PedCheck: a program for identification of genotype incompatibilities in linkage analysis.

Authors:  J R O'Connell; D E Weeks
Journal:  Am J Hum Genet       Date:  1998-07       Impact factor: 11.025

2.  Variations in the NRAMP1 gene and susceptibility to tuberculosis in West Africans.

Authors:  R Bellamy; C Ruwende; T Corrah; K P McAdam; H C Whittle; A V Hill
Journal:  N Engl J Med       Date:  1998-03-05       Impact factor: 91.245

3.  POMC gene-derived peptides activate melanocortin type 3 receptor on murine macrophages, suppress cytokine release, and inhibit neutrophil migration in acute experimental inflammation.

Authors:  S J Getting; L Gibbs; A J Clark; R J Flower; M Perretti
Journal:  J Immunol       Date:  1999-06-15       Impact factor: 5.422

4.  Polymorphism within the interferon-gamma/receptor complex is associated with pulmonary tuberculosis.

Authors:  Graham S Cooke; Sarah J Campbell; Jackson Sillah; Per Gustafson; Boubacar Bah; Georgio Sirugo; Steve Bennett; Keith P W J McAdam; Oumou Sow; Christian Lienhardt; Adrian V S Hill
Journal:  Am J Respir Crit Care Med       Date:  2006-05-11       Impact factor: 21.405

5.  SLC11A1 (NRAMP1) but not SLC11A2 (NRAMP2) polymorphisms are associated with susceptibility to tuberculosis in a high-incidence community in South Africa.

Authors:  E G Hoal; L A Lewis; S E Jamieson; F Tanzer; M Rossouw; T Victor; R Hillerman; N Beyers; J M Blackwell; P D Van Helden
Journal:  Int J Tuberc Lung Dis       Date:  2004-12       Impact factor: 2.373

6.  Melanocortin 3 receptors control crystal-induced inflammation.

Authors:  Stephen J Getting; Connie W Lam; Airu S Chen; Paolo Grieco; Mauro Perretti
Journal:  FASEB J       Date:  2006-11       Impact factor: 5.191

7.  Two stage genome-wide search in inflammatory bowel disease provides evidence for susceptibility loci on chromosomes 3, 7 and 12.

Authors:  J Satsangi; M Parkes; E Louis; L Hashimoto; N Kato; K Welsh; J D Terwilliger; G M Lathrop; J I Bell; D P Jewell
Journal:  Nat Genet       Date:  1996-10       Impact factor: 38.330

8.  The neuropeptide alpha-melanocyte-stimulating hormone inhibits experimental arthritis in rats.

Authors:  G Ceriani; J Diaz; S Murphree; A Catania; J M Lipton
Journal:  Neuroimmunomodulation       Date:  1994-01       Impact factor: 2.492

9.  Cathepsin Z, a novel human cysteine proteinase with a short propeptide domain and a unique chromosomal location.

Authors:  I Santamaría; G Velasco; A M Pendás; A Fueyo; C López-Otín
Journal:  J Biol Chem       Date:  1998-07-03       Impact factor: 5.157

10.  A Mal functional variant is associated with protection against invasive pneumococcal disease, bacteremia, malaria and tuberculosis.

Authors:  Chiea C Khor; Stephen J Chapman; Fredrik O Vannberg; Aisling Dunne; Caroline Murphy; Edmund Y Ling; Angela J Frodsham; Andrew J Walley; Otto Kyrieleis; Amir Khan; Christophe Aucan; Shelley Segal; Catrin E Moore; Kyle Knox; Sarah J Campbell; Christian Lienhardt; Anthony Scott; Peter Aaby; Oumou Y Sow; Robert T Grignani; Jackson Sillah; Giorgio Sirugo; Nobert Peshu; Thomas N Williams; Kathryn Maitland; Robert J O Davies; Dominic P Kwiatkowski; Nicholas P Day; Djamel Yala; Derrick W Crook; Kevin Marsh; James A Berkley; Luke A J O'Neill; Adrian V S Hill
Journal:  Nat Genet       Date:  2007-02-25       Impact factor: 38.330

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  36 in total

1.  Candidate genes versus genome-wide associations: which are better for detecting genetic susceptibility to infectious disease?

Authors:  W Amos; E Driscoll; J I Hoffman
Journal:  Proc Biol Sci       Date:  2010-10-06       Impact factor: 5.349

Review 2.  Genetics and evolution of tuberculosis pathogenesis: New perspectives and approaches.

Authors:  Michael L McHenry; Scott M Williams; Catherine M Stein
Journal:  Infect Genet Evol       Date:  2020-01-22       Impact factor: 3.342

3.  Association analysis of melanocortin 3 receptor polymorphisms with the risk of pulmonary tuberculosis.

Authors:  Byung Lae Park; Lyoung Hyo Kim; Suhg Namgoong; Ji On Kim; Jason Yongha Kim; Hun Soo Chang; Jong Sook Park; An Soo Jang; Sung Woo Park; Do Jin Kim; Ki Up Kim; Yang Gee Kim; Soo-Taek Uh; Ki Hyun Seo; Young Hoon Kim; Choon Sik Park; Hyoung Doo Shin
Journal:  Lung       Date:  2014-07-27       Impact factor: 2.584

Review 4.  Control of myeloid cell trafficking in resolution.

Authors:  Lucy V Norling; Mauro Perretti
Journal:  J Innate Immun       Date:  2013-04-30       Impact factor: 7.349

Review 5.  Innate immune gene polymorphisms in tuberculosis.

Authors:  Abul K Azad; Wolfgang Sadee; Larry S Schlesinger
Journal:  Infect Immun       Date:  2012-07-23       Impact factor: 3.441

6.  Polymorphisms in MC3R promoter and CTSZ 3'UTR are associated with tuberculosis susceptibility.

Authors:  Lindsey A Adams; Marlo Möller; Almut Nebel; Stefan Schreiber; Lize van der Merwe; Paul D van Helden; Eileen G Hoal
Journal:  Eur J Hum Genet       Date:  2011-02-02       Impact factor: 4.246

Review 7.  Knowledge gaining by human genetic studies on tuberculosis susceptibility.

Authors:  Hui-Qi Qu; Susan P Fisher-Hoch; Joseph B McCormick
Journal:  J Hum Genet       Date:  2010-12-23       Impact factor: 3.172

8.  Genetic susceptibility to tuberculosis associated with cathepsin Z haplotype in a Ugandan household contact study.

Authors:  Allison R Baker; Sarah Zalwango; LaShaunda L Malone; Robert P Igo; Feiyou Qiu; Mary Nsereko; Mark D Adams; Pamela Supelak; Harriet Mayanja-Kizza; W Henry Boom; Catherine M Stein
Journal:  Hum Immunol       Date:  2011-02-25       Impact factor: 2.850

9.  FOXO3 rs12212067: T > G Association with Active Tuberculosis in Han Chinese Population.

Authors:  Yanjun Lu; Yaowu Zhu; Xiong Wang; Feng Wang; Jing Peng; Hongyan Hou; Ziyong Sun
Journal:  Inflammation       Date:  2016-02       Impact factor: 4.092

10.  Polymorphic exact tandem repeat A (PETRA): a newly defined lineage of mycobacterium tuberculosis in israel originating predominantly in Sub-Saharan Africa.

Authors:  Paul J Freidlin; Drora Goldblatt; Hasia Kaidar-Shwartz; Efrat Rorman
Journal:  J Clin Microbiol       Date:  2009-10-21       Impact factor: 5.948

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