Literature DB >> 18418381

Oxygen-regulated degradation of fission yeast SREBP by Ofd1, a prolyl hydroxylase family member.

Bridget T Hughes1, Peter J Espenshade.   

Abstract

Sre1, the fission yeast sterol regulatory element binding protein, is an endoplasmic reticulum membrane-bound transcription factor that responds to changes in oxygen-dependent sterol synthesis as an indirect measure of oxygen availability. Under low oxygen, Sre1 is proteolytically cleaved and the released N-terminal transcription factor (Sre1N) activates gene expression essential for hypoxic growth. Here, we describe an oxygen-dependent mechanism for regulation of Sre1 that is independent of sterol-regulated proteolysis. Using yeast expressing only Sre1N, we show that Sre1N turnover is regulated by oxygen. Ofd1, an uncharacterized prolyl 4-hydroxylase-like 2-oxoglutarate-Fe(II) dioxygenase, accelerates Sre1N degradation in the presence of oxygen. However, unlike the prolyl 4-hydroxylases that regulate mammalian hypoxia-inducible factor, Ofd1 uses multiple domains to regulate Sre1N degradation by oxygen; the Ofd1 N-terminal dioxygenase domain is required for oxygen sensing and the Ofd1 C-terminal domain accelerates Sre1N degradation. Our data support a model whereby the Ofd1 N-terminal dioxygenase domain is an oxygen sensor that regulates the activity of the C-terminal degradation domain.

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Year:  2008        PMID: 18418381      PMCID: PMC2396400          DOI: 10.1038/emboj.2008.83

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  34 in total

1.  Targeting, disruption, replacement, and allele rescue: integrative DNA transformation in yeast.

Authors:  R Rothstein
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

2.  5-Fluoroorotic acid as a selective agent in yeast molecular genetics.

Authors:  J D Boeke; J Trueheart; G Natsoulis; G R Fink
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

3.  A conditional lethal mutant in the fission yeast 26 S protease subunit mts3+ is defective in metaphase to anaphase transition.

Authors:  C Gordon; G McGurk; M Wallace; N D Hastie
Journal:  J Biol Chem       Date:  1996-03-08       Impact factor: 5.157

4.  Comparison of Schizosaccharomyces pombe expression systems.

Authors:  S L Forsburg
Journal:  Nucleic Acids Res       Date:  1993-06-25       Impact factor: 16.971

5.  Molecular genetic analysis of fission yeast Schizosaccharomyces pombe.

Authors:  S Moreno; A Klar; P Nurse
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

6.  Molecular cloning and characterization of the Schizosaccharomyces pombe his3 gene for use as a selectable marker.

Authors:  J D Burke; K L Gould
Journal:  Mol Gen Genet       Date:  1994-01

7.  Eukaryotic proteins expressed in Escherichia coli: an improved thrombin cleavage and purification procedure of fusion proteins with glutathione S-transferase.

Authors:  K L Guan; J E Dixon
Journal:  Anal Biochem       Date:  1991-02-01       Impact factor: 3.365

8.  The use of cell division cycle mutants to investigate the control of microtubule distribution in the fission yeast Schizosaccharomyces pombe.

Authors:  I M Hagan; J S Hyams
Journal:  J Cell Sci       Date:  1988-03       Impact factor: 5.285

9.  The DNA-repair protein AlkB, EGL-9, and leprecan define new families of 2-oxoglutarate- and iron-dependent dioxygenases.

Authors:  L Aravind; E V Koonin
Journal:  Genome Biol       Date:  2001-02-19       Impact factor: 13.583

10.  Oxygen-dependent, alternative promoter controls translation of tco1+ in fission yeast.

Authors:  Alfica Sehgal; Bridget T Hughes; Peter J Espenshade
Journal:  Nucleic Acids Res       Date:  2008-02-14       Impact factor: 16.971

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  64 in total

1.  Evolutionary origins of oxygen sensing in animals.

Authors:  Kalle T Rytkönen; Jay F Storz
Journal:  EMBO Rep       Date:  2010-11-26       Impact factor: 8.807

2.  Regulation of the hypoxic response in Candida albicans.

Authors:  John M Synnott; Alessandro Guida; Siobhan Mulhern-Haughey; Desmond G Higgins; Geraldine Butler
Journal:  Eukaryot Cell       Date:  2010-09-24

3.  Regulation of the Sre1 hypoxic transcription factor by oxygen-dependent control of DNA binding.

Authors:  Chih-Yung S Lee; Tzu-Lan Yeh; Bridget T Hughes; Peter J Espenshade
Journal:  Mol Cell       Date:  2011-10-21       Impact factor: 17.970

4.  Degradation of sterol regulatory element-binding protein precursor requires the endoplasmic reticulum-associated degradation components Ubc7 and Hrd1 in fission yeast.

Authors:  Bridget T Hughes; Christine C Nwosu; Peter J Espenshade
Journal:  J Biol Chem       Date:  2009-06-11       Impact factor: 5.157

Review 5.  Evolutionary conservation and adaptation in the mechanism that regulates SREBP action: what a long, strange tRIP it's been.

Authors:  Timothy F Osborne; Peter J Espenshade
Journal:  Genes Dev       Date:  2009-11-15       Impact factor: 11.361

6.  Mga2 Transcription Factor Regulates an Oxygen-responsive Lipid Homeostasis Pathway in Fission Yeast.

Authors:  Risa Burr; Emerson V Stewart; Wei Shao; Shan Zhao; Hans Kristian Hannibal-Bach; Christer S Ejsing; Peter J Espenshade
Journal:  J Biol Chem       Date:  2016-04-06       Impact factor: 5.157

Review 7.  Candida albicans hyphal initiation and elongation.

Authors:  Yang Lu; Chang Su; Haoping Liu
Journal:  Trends Microbiol       Date:  2014-09-25       Impact factor: 17.079

8.  Casein kinase 1 regulates sterol regulatory element-binding protein (SREBP) to control sterol homeostasis.

Authors:  Rita T Brookheart; Chih-Yung S Lee; Peter J Espenshade
Journal:  J Biol Chem       Date:  2013-12-10       Impact factor: 5.157

9.  Sudestada1, a Drosophila ribosomal prolyl-hydroxylase required for mRNA translation, cell homeostasis, and organ growth.

Authors:  Maximiliano J Katz; Julieta M Acevedo; Christoph Loenarz; Diego Galagovsky; Phebee Liu-Yi; Marcelo Pérez-Pepe; Armin Thalhammer; Rok Sekirnik; Wei Ge; Mariana Melani; María G Thomas; Sergio Simonetta; Graciela L Boccaccio; Christopher J Schofield; Matthew E Cockman; Peter J Ratcliffe; Pablo Wappner
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

10.  Hydroxylation of the eukaryotic ribosomal decoding center affects translational accuracy.

Authors:  Christoph Loenarz; Rok Sekirnik; Armin Thalhammer; Wei Ge; Ekaterina Spivakovsky; Mukram M Mackeen; Michael A McDonough; Matthew E Cockman; Benedikt M Kessler; Peter J Ratcliffe; Alexander Wolf; Christopher J Schofield
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

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