Literature DB >> 18414813

Phenylacetate metabolism in thermophiles: characterization of phenylacetate-CoA ligase, the initial enzyme of the hybrid pathway in Thermus thermophilus.

Tobias J Erb1, Wael Ismail, Georg Fuchs.   

Abstract

Phenylacetate-CoA ligase (E.C. 6.2.1.30), the initial enzyme in the metabolism of phenylacetate, was studied in Thermus thermophilus strain HB27. Enzymatic activity was upregulated during growth on phenylacetate or phenylalanine. The phenylacetate-CoA ligase gene (paaK) was cloned and heterologously expressed in Escherichia coli and the recombinant protein was purified. The enzyme catalyzed phenylacetate + CoA + MgATP --> phenylacetyl-CoA + AMP + MgPP(i) with a V(max) of 24 micromol/min/mg protein at a temperature optimum of 75 degrees C. The apparent K(m) values for ATP, CoA, and phenylacetate were 6, 30, and 50 microM: , respectively. The protein was highly specific toward phenylacetate and showed only low activity with 4-hydroxyphenylacetate. Despite an amino acid sequence identity of >50% with its mesophilic homologues, phenylacetate-CoA ligase was heat stable. The genome contained further homologues of genes, which are postulated to be involved in the CoA ester-dependent metabolic pathway of phenylacetate (hybrid pathway). Enzymes of this thermophile are expected to be robust and might be useful for further studies of this yet unresolved pathway.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18414813     DOI: 10.1007/s00284-008-9147-3

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  23 in total

Review 1.  Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability.

Authors:  C Vieille; G J Zeikus
Journal:  Microbiol Mol Biol Rev       Date:  2001-03       Impact factor: 11.056

Review 2.  Structure-function analysis of the bacterial aromatic ring-hydroxylating dioxygenases.

Authors:  C S Butler; J R Mason
Journal:  Adv Microb Physiol       Date:  1997       Impact factor: 3.517

3.  A novel pathway of aerobic benzoate catabolism in the bacteria Azoarcus evansii and Bacillus stearothermophilus.

Authors:  A Zaar; W Eisenreich; A Bacher; G Fuchs
Journal:  J Biol Chem       Date:  2001-04-16       Impact factor: 5.157

4.  Styrene lower catabolic pathway in Pseudomonas fluorescens ST: identification and characterization of genes for phenylacetic acid degradation.

Authors:  Patrizia Di Gennaro; Silvia Ferrara; Ilaria Ronco; Enrica Galli; Guido Sello; Maddalena Papacchini; Giuseppina Bestetti
Journal:  Arch Microbiol       Date:  2007-03-22       Impact factor: 2.552

Review 5.  The phenylacetyl-CoA catabolon: a complex catabolic unit with broad biotechnological applications.

Authors:  J M Luengo; J L García; E R Olivera
Journal:  Mol Microbiol       Date:  2001-03       Impact factor: 3.501

6.  4-Sulphobenzoate 3,4-dioxygenase. Purification and properties of a desulphonative two-component enzyme system from Comamonas testosteroni T-2.

Authors:  H H Locher; T Leisinger; A M Cook
Journal:  Biochem J       Date:  1991-03-15       Impact factor: 3.857

7.  Characterization of a second functional gene cluster for the catabolism of phenylacetic acid in Pseudomonas sp. strain Y2.

Authors:  David Bartolomé-Martín; Esteban Martínez-García; Victoria Mascaraque; Julio Rubio; Julián Perera; Sergio Alonso
Journal:  Gene       Date:  2004-10-27       Impact factor: 3.688

8.  The evolution of the phenylacetic acid degradation pathway in bacteria.

Authors:  Rei Abe-Yoshizumi; Urara Kamei; Asami Yamada; Makoto Kimura; Shigeyuki Ichihara
Journal:  Biosci Biotechnol Biochem       Date:  2004-03       Impact factor: 2.043

9.  Purification and biochemical characterization of phenylacetyl-CoA ligase from Pseudomonas putida. A specific enzyme for the catabolism of phenylacetic acid.

Authors:  H Martínez-Blanco; A Reglero; L B Rodriguez-Aparicio; J M Luengo
Journal:  J Biol Chem       Date:  1990-04-25       Impact factor: 5.157

10.  Catabolism of phenylacetic acid in Escherichia coli. Characterization of a new aerobic hybrid pathway.

Authors:  A Ferrández; B Miñambres; B García; E R Olivera; J M Luengo; J L García; E Díaz
Journal:  J Biol Chem       Date:  1998-10-02       Impact factor: 5.157

View more
  11 in total

1.  Genetic analysis of the upper phenylacetate catabolic pathway in the production of tropodithietic acid by Phaeobacter gallaeciensis.

Authors:  Martine Berger; Nelson L Brock; Heiko Liesegang; Marco Dogs; Ines Preuth; Meinhard Simon; Jeroen S Dickschat; Thorsten Brinkhoff
Journal:  Appl Environ Microbiol       Date:  2012-03-09       Impact factor: 4.792

2.  An oxygenase that forms and deoxygenates toxic epoxide.

Authors:  Robin Teufel; Thorsten Friedrich; Georg Fuchs
Journal:  Nature       Date:  2012-03-07       Impact factor: 49.962

3.  Studies on the mechanism of ring hydrolysis in phenylacetate degradation: a metabolic branching point.

Authors:  Robin Teufel; Carla Gantert; Michaela Voss; Wolfgang Eisenreich; Wolfgang Haehnel; Georg Fuchs
Journal:  J Biol Chem       Date:  2011-02-04       Impact factor: 5.157

4.  Defining a structural and kinetic rationale for paralogous copies of phenylacetate-CoA ligases from the cystic fibrosis pathogen Burkholderia cenocepacia J2315.

Authors:  Adrienne Law; Martin J Boulanger
Journal:  J Biol Chem       Date:  2011-03-08       Impact factor: 5.157

5.  Bacterial phenylalanine and phenylacetate catabolic pathway revealed.

Authors:  R Teufel; V Mascaraque; W Ismail; M Voss; J Perera; W Eisenreich; W Haehnel; G Fuchs
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-21       Impact factor: 11.205

Review 6.  Structural Organization of Enzymes of the Phenylacetate Catabolic Hybrid Pathway.

Authors:  Andrey M Grishin; Miroslaw Cygler
Journal:  Biology (Basel)       Date:  2015-06-12

7.  Transcriptional Analysis of Acinetobacter sp. neg1 Capable of Degrading Ochratoxin A.

Authors:  Vania C Liuzzi; Francesca Fanelli; Mariana Tristezza; Miriam Haidukowski; Ernesto Picardi; Caterina Manzari; Claudia Lionetti; Francesco Grieco; Antonio F Logrieco; Michael R Thon; Graziano Pesole; Giuseppina Mulè
Journal:  Front Microbiol       Date:  2017-01-09       Impact factor: 5.640

Review 8.  Progress in structural and functional study of the bacterial phenylacetic acid catabolic pathway, its role in pathogenicity and antibiotic resistance.

Authors:  Min Jiao; Wenbo He; Zhenlin Ouyang; Qindong Shi; Yurong Wen
Journal:  Front Microbiol       Date:  2022-09-08       Impact factor: 6.064

Review 9.  Bacterial Tropone Natural Products and Derivatives: Overview of their Biosynthesis, Bioactivities, Ecological Role and Biotechnological Potential.

Authors:  Ying Duan; Melanie Petzold; Raspudin Saleem-Batcha; Robin Teufel
Journal:  Chembiochem       Date:  2020-05-08       Impact factor: 3.164

10.  A Flavoprotein Dioxygenase Steers Bacterial Tropone Biosynthesis via Coenzyme A-Ester Oxygenolysis and Ring Epoxidation.

Authors:  Ying Duan; Marina Toplak; Anwei Hou; Nelson L Brock; Jeroen S Dickschat; Robin Teufel
Journal:  J Am Chem Soc       Date:  2021-07-01       Impact factor: 15.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.