Literature DB >> 18412391

Physical organic chemistry on the brain.

Dennis A Dougherty1.   

Abstract

The challenges to obtaining chemical-scale information on the molecules of neuroscience are considerable. Most targets are complex integral membrane proteins that are not amenable to direct structural characterization. However, by combining the tools of organic synthesis, molecular biology, and electrophysiology, rational and systematic structure-function studies can be performed in what we have termed physical organic chemistry on the brain. Using these tools, we have probed hydrophobic effects, hydrogen bonding, cation-pi interactions, and conformational changes associated with channel gating. The insights gained provide important guidance for drug discovery efforts targeting ion channels and neuroreceptors and mechanistic insights for the complex proteins of neuroscience.

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Year:  2008        PMID: 18412391     DOI: 10.1021/jo8001722

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  19 in total

1.  Boron in disguise: the parent "fused" BN indole.

Authors:  Eric R Abbey; Lev N Zakharov; Shih-Yuan Liu
Journal:  J Am Chem Soc       Date:  2011-07-13       Impact factor: 15.419

Review 2.  Emerging approaches to probing ion channel structure and function.

Authors:  Wei-Guang Li; Tian-Le Xu
Journal:  Neurosci Bull       Date:  2012-08       Impact factor: 5.203

3.  Docking studies of benzylidene anabaseine interactions with α7 nicotinic acetylcholine receptor (nAChR) and acetylcholine binding proteins (AChBPs): application to the design of related α7 selective ligands.

Authors:  David C Kombo; Anatoly Mazurov; Kartik Tallapragada; Philip S Hammond; Joseph Chewning; Terry A Hauser; Montserrat Vasquez-Valdivieso; Daniel Yohannes; Todd T Talley; Palmer Taylor; William S Caldwell
Journal:  Eur J Med Chem       Date:  2011-09-29       Impact factor: 6.514

4.  Using mutant cycle analysis to elucidate long-range functional coupling in allosteric receptors.

Authors:  Jai A P Shanata; Shawnalea J Frazier; Henry A Lester; Dennis A Dougherty
Journal:  Methods Mol Biol       Date:  2012

5.  Relative substituent position on the strength of pi-pi stacking interactions.

Authors:  Benjamin W Gung; Bright U Emenike; Celeste N Alverez; John Rakovan; Kristin Kirschbaum; Nirbhay Jain
Journal:  Tetrahedron Lett       Date:  2010-03-31       Impact factor: 2.415

6.  Ondansetron and granisetron binding orientation in the 5-HT(3) receptor determined by unnatural amino acid mutagenesis.

Authors:  Noah H Duffy; Henry A Lester; Dennis A Dougherty
Journal:  ACS Chem Biol       Date:  2012-08-15       Impact factor: 5.100

7.  Use of anion-aromatic interactions to position the general base in the ketosteroid isomerase active site.

Authors:  Jason P Schwans; Fanny Sunden; Jonathan K Lassila; Ana Gonzalez; Yingssu Tsai; Daniel Herschlag
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-24       Impact factor: 11.205

8.  Variations in binding among several agonists at two stoichiometries of the neuronal, α4β2 nicotinic receptor.

Authors:  Ximena Da Silva Tavares; Angela P Blum; Darren T Nakamura; Nyssa L Puskar; Jai A P Shanata; Henry A Lester; Dennis A Dougherty
Journal:  J Am Chem Soc       Date:  2012-07-09       Impact factor: 15.419

9.  Substituent effects in cation/pi interactions and electrostatic potentials above the centers of substituted benzenes are due primarily to through-space effects of the substituents.

Authors:  Steven E Wheeler; K N Houk
Journal:  J Am Chem Soc       Date:  2009-03-11       Impact factor: 15.419

10.  Nicotine binding to brain receptors requires a strong cation-pi interaction.

Authors:  Xinan Xiu; Nyssa L Puskar; Jai A P Shanata; Henry A Lester; Dennis A Dougherty
Journal:  Nature       Date:  2009-03-01       Impact factor: 49.962

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