Literature DB >> 18410726

Epigenetic blocking of an enhancer region controls irradiation-induced proapoptotic gene expression in Drosophila embryos.

Yanping Zhang1, Nianwei Lin, Pamela M Carroll, Gina Chan, Bo Guan, Hong Xiao, Bing Yao, Samuel S Wu, Lei Zhou.   

Abstract

Drosophila embryos are highly sensitive to gamma-ray-induced apoptosis at early but not later, more differentiated stages during development. Two proapoptotic genes, reaper and hid, are upregulated rapidly following irradiation. However, in post-stage-12 embryos, in which most cells have begun differentiation, neither proapoptotic gene can be induced by high doses of irradiation. Our study indicates that the sensitive-to-resistant transition is due to epigenetic blocking of the irradiation-responsive enhancer region (IRER), which is located upstream of reaper but is also required for the induction of hid in response to irradiation. This IRER, but not the transcribed regions of reaper/hid, becomes enriched for trimethylated H3K27/H3K9 and forms a heterochromatin-like structure during the sensitive-to-resistant transition. The functions of histone-modifying enzymes Hdac1(rpd3) and Su(var)3-9 and PcG proteins Su(z)12 and Polycomb are required for this process. Thus, direct epigenetic regulation of two proapoptotic genes controls cellular sensitivity to cytotoxic stimuli.

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Year:  2008        PMID: 18410726      PMCID: PMC2901920          DOI: 10.1016/j.devcel.2008.01.018

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  29 in total

1.  Significance analysis of microarrays applied to the ionizing radiation response.

Authors:  V G Tusher; R Tibshirani; G Chu
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-17       Impact factor: 11.205

2.  Drosophila p53 binds a damage response element at the reaper locus.

Authors:  M H Brodsky; W Nordstrom; G Tsang; E Kwan; G M Rubin; J M Abrams
Journal:  Cell       Date:  2000-03-31       Impact factor: 41.582

3.  Accessibility of transcriptionally inactive genes is specifically reduced at homeoprotein-DNA binding sites in Drosophila.

Authors:  A Carr; M D Biggin
Journal:  Nucleic Acids Res       Date:  2000-07-15       Impact factor: 16.971

Review 4.  Translating the histone code.

Authors:  T Jenuwein; C D Allis
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

5.  VISTA : visualizing global DNA sequence alignments of arbitrary length.

Authors:  C Mayor; M Brudno; J R Schwartz; A Poliakov; E M Rubin; K A Frazer; L S Pachter; I Dubchak
Journal:  Bioinformatics       Date:  2000-11       Impact factor: 6.937

6.  HAC-1, a Drosophila homolog of APAF-1 and CED-4 functions in developmental and radiation-induced apoptosis.

Authors:  L Zhou; Z Song; J Tittel; H Steller
Journal:  Mol Cell       Date:  1999-11       Impact factor: 17.970

7.  The damage-responsive Drosophila gene sickle encodes a novel IAP binding protein similar to but distinct from reaper, grim, and hid.

Authors:  Anna Christich; Saila Kauppila; Po Chen; Naoko Sogame; Su Inn Ho; John M Abrams
Journal:  Curr Biol       Date:  2002-01-22       Impact factor: 10.834

8.  Identification and characterization of a p53 homologue in Drosophila melanogaster.

Authors:  S Jin; S Martinek; W S Joo; J R Wortman; N Mirkovic; A Sali; M D Yandell; N P Pavletich; M W Young; A J Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

9.  reaper is required for neuroblast apoptosis during Drosophila development.

Authors:  Christian Peterson; Ginger E Carney; Barbara J Taylor; Kristin White
Journal:  Development       Date:  2002-03       Impact factor: 6.868

10.  Regulated chromatin domain comprising cluster of co-expressed genes in Drosophila melanogaster.

Authors:  Alla I Kalmykova; Dmitry I Nurminsky; Dmirty V Ryzhov; Yuri Y Shevelyov
Journal:  Nucleic Acids Res       Date:  2005-03-08       Impact factor: 16.971

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  46 in total

1.  A barrier-only boundary element delimits the formation of facultative heterochromatin in Drosophila melanogaster and vertebrates.

Authors:  Nianwei Lin; Xingguo Li; Kairong Cui; Iouri Chepelev; Feng Tie; Bo Liu; Guangyao Li; Peter Harte; Keji Zhao; Suming Huang; Lei Zhou
Journal:  Mol Cell Biol       Date:  2011-04-25       Impact factor: 4.272

Review 2.  Extra sex combs, chromatin, and cancer: exploring epigenetic regulation and tumorigenesis in Drosophila.

Authors:  Can Zhang; Bo Liu; Guangyao Li; Lei Zhou
Journal:  J Genet Genomics       Date:  2011-09-24       Impact factor: 4.275

3.  Pro-apoptotic signaling pathway by CDK5 and MEKK1.

Authors:  Hyung Don Ryoo
Journal:  Cell Cycle       Date:  2012-05-01       Impact factor: 4.534

4.  Staying alive: dalmation mediated blocking of apoptosis is essential for tissue maintenance.

Authors:  Bilal E Kerman; Deborah J Andrew
Journal:  Dev Dyn       Date:  2010-06       Impact factor: 3.780

Review 5.  Cell death in development: Signaling pathways and core mechanisms.

Authors:  Richa Arya; Kristin White
Journal:  Semin Cell Dev Biol       Date:  2015-02-07       Impact factor: 7.727

6.  Coordinated expression of cell death genes regulates neuroblast apoptosis.

Authors:  Ying Tan; Megumu Yamada-Mabuchi; Richa Arya; Susan St Pierre; Wei Tang; Marie Tosa; Carrie Brachmann; Kristin White
Journal:  Development       Date:  2011-06       Impact factor: 6.868

7.  The domino SWI2/SNF2 Gene Product Represses Cell Death in Drosophila melanogaster.

Authors:  Kaitlyn Ellis; Joanna Wardwell-Ozgo; Kenneth H Moberg; Barry Yedvobnick
Journal:  G3 (Bethesda)       Date:  2018-07-02       Impact factor: 3.154

Review 8.  Genetic control of programmed cell death (apoptosis) in Drosophila.

Authors:  Dongbin Xu; Sarah E Woodfield; Tom V Lee; Yun Fan; Christian Antonio; Andreas Bergmann
Journal:  Fly (Austin)       Date:  2009-01-08       Impact factor: 2.160

9.  Endocycling cells do not apoptose in response to DNA rereplication genotoxic stress.

Authors:  Sonam Mehrotra; Shahina B Maqbool; Alexis Kolpakas; Katherine Murnen; Brian R Calvi
Journal:  Genes Dev       Date:  2008-11-15       Impact factor: 11.361

10.  Temporal regulation of Drosophila IAP1 determines caspase functions in sensory organ development.

Authors:  Akiko Koto; Erina Kuranaga; Masayuki Miura
Journal:  J Cell Biol       Date:  2009-10-12       Impact factor: 10.539

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