Literature DB >> 18408709

Functional genomic screen reveals genes involved in lipid-droplet formation and utilization.

Yi Guo1, Tobias C Walther, Meghana Rao, Nico Stuurman, Gohta Goshima, Koji Terayama, Jinny S Wong, Ronald D Vale, Peter Walter, Robert V Farese.   

Abstract

Eukaryotic cells store neutral lipids in cytoplasmic lipid droplets enclosed in a monolayer of phospholipids and associated proteins. These dynamic organelles serve as the principal reservoirs for storing cellular energy and for the building blocks for membrane lipids. Excessive lipid accumulation in cells is a central feature of obesity, diabetes and atherosclerosis, yet remarkably little is known about lipid-droplet cell biology. Here we show, by means of a genome-wide RNA interference (RNAi) screen in Drosophila S2 cells that about 1.5% of all genes function in lipid-droplet formation and regulation. The phenotypes of the gene knockdowns sorted into five distinct phenotypic classes. Genes encoding enzymes of phospholipid biosynthesis proved to be determinants of lipid-droplet size and number, suggesting that the phospholipid composition of the monolayer profoundly affects droplet morphology and lipid utilization. A subset of the Arf1-COPI vesicular transport proteins also regulated droplet morphology and lipid utilization, thereby identifying a previously unrecognized function for this machinery. These phenotypes are conserved in mammalian cells, suggesting that insights from these studies are likely to be central to our understanding of human diseases involving excessive lipid storage.

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Year:  2008        PMID: 18408709      PMCID: PMC2734507          DOI: 10.1038/nature06928

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  30 in total

1.  Prevalence of off-target effects in Drosophila RNA interference screens.

Authors:  Yong Ma; Adrian Creanga; Lawrence Lum; Philip A Beachy
Journal:  Nature       Date:  2006-09-10       Impact factor: 49.962

2.  Rapid, specific, and sensitive measurements of plasma sphingomyelin and phosphatidylcholine.

Authors:  Mohammad Reza Hojjati; Xian-Cheng Jiang
Journal:  J Lipid Res       Date:  2005-12-21       Impact factor: 5.922

3.  Stimulation of lipolysis enhances the rate of cholesterol efflux to HDL in adipocytes.

Authors:  Philip B Verghese; Estela L Arrese; Jose L Soulages
Journal:  Mol Cell Biochem       Date:  2007-03-28       Impact factor: 3.396

4.  Regulation of SREBP processing and membrane lipid production by phospholipids in Drosophila.

Authors:  I Y Dobrosotskaya; A C Seegmiller; M S Brown; J L Goldstein; R B Rawson
Journal:  Science       Date:  2002-05-03       Impact factor: 47.728

Review 5.  Regulatory enzymes of phosphatidylcholine biosynthesis: a personal perspective.

Authors:  Claudia Kent
Journal:  Biochim Biophys Acta       Date:  2005-01-22

6.  The phosphorylation of serine 492 of perilipin a directs lipid droplet fragmentation and dispersion.

Authors:  Amy Marcinkiewicz; Denise Gauthier; Anne Garcia; Dawn L Brasaemle
Journal:  J Biol Chem       Date:  2006-02-17       Impact factor: 5.157

7.  The lipid droplet is an important organelle for hepatitis C virus production.

Authors:  Yusuke Miyanari; Kimie Atsuzawa; Nobuteru Usuda; Koichi Watashi; Takayuki Hishiki; Margarita Zayas; Ralf Bartenschlager; Takaji Wakita; Makoto Hijikata; Kunitada Shimotohno
Journal:  Nat Cell Biol       Date:  2007-08-26       Impact factor: 28.824

8.  Phospholipid membrane composition affects EGF receptor and Notch signaling through effects on endocytosis during Drosophila development.

Authors:  Ursula Weber; Cagla Eroglu; Marek Mlodzik
Journal:  Dev Cell       Date:  2003-10       Impact factor: 12.270

9.  Genes required for mitotic spindle assembly in Drosophila S2 cells.

Authors:  Gohta Goshima; Roy Wollman; Sarah S Goodwin; Nan Zhang; Jonathan M Scholey; Ronald D Vale; Nico Stuurman
Journal:  Science       Date:  2007-04-05       Impact factor: 47.728

10.  Molecular requirements for actin-based lamella formation in Drosophila S2 cells.

Authors:  Stephen L Rogers; Ursula Wiedemann; Nico Stuurman; Ronald D Vale
Journal:  J Cell Biol       Date:  2003-09-15       Impact factor: 10.539

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  305 in total

1.  Genome-wide RNAi screening identifies human proteins with a regulatory function in the early secretory pathway.

Authors:  Jeremy C Simpson; Brigitte Joggerst; Vibor Laketa; Fatima Verissimo; Cihan Cetin; Holger Erfle; Mariana G Bexiga; Vasanth R Singan; Jean-Karim Hériché; Beate Neumann; Alvaro Mateos; Jonathon Blake; Stephanie Bechtel; Vladimir Benes; Stefan Wiemann; Jan Ellenberg; Rainer Pepperkok
Journal:  Nat Cell Biol       Date:  2012-06-03       Impact factor: 28.824

Review 2.  The role of lipid droplets in metabolic disease in rodents and humans.

Authors:  Andrew S Greenberg; Rosalind A Coleman; Fredric B Kraemer; James L McManaman; Martin S Obin; Vishwajeet Puri; Qing-Wu Yan; Hideaki Miyoshi; Douglas G Mashek
Journal:  J Clin Invest       Date:  2011-06-01       Impact factor: 14.808

Review 3.  The dynamic roles of intracellular lipid droplets: from archaea to mammals.

Authors:  Denis J Murphy
Journal:  Protoplasma       Date:  2011-10-15       Impact factor: 3.356

4.  A novel protein kinase localized to lipid droplets is required for droplet biogenesis in trypanosomes.

Authors:  John A Flaspohler; Bryan C Jensen; Tracy Saveria; Charles T Kifer; Marilyn Parsons
Journal:  Eukaryot Cell       Date:  2010-09-10

5.  Intermittent ischaemia maintains function after ischaemia reperfusion in steatotic livers.

Authors:  Mathilde Steenks; Mark C P M van Baal; Vincent B Nieuwenhuijs; Menno T de Bruijn; Marc Schiesser; Mike H Teo; Tom Callahan; Rob T A Padbury; Greg J Barritt
Journal:  HPB (Oxford)       Date:  2010-05       Impact factor: 3.647

6.  The Puzzling Conservation and Diversification of Lipid Droplets from Bacteria to Eukaryotes.

Authors:  Josselin Lupette; Eric Maréchal
Journal:  Results Probl Cell Differ       Date:  2020

7.  Determinants of Endoplasmic Reticulum-to-Lipid Droplet Protein Targeting.

Authors:  Maria-Jesus Olarte; Siyoung Kim; Morris E Sharp; Jessica M J Swanson; Robert V Farese; Tobias C Walther
Journal:  Dev Cell       Date:  2020-07-29       Impact factor: 12.270

Review 8.  Lipid Droplets as Organelles.

Authors:  Sarah Cohen
Journal:  Int Rev Cell Mol Biol       Date:  2018-02-12       Impact factor: 6.813

9.  Dissecting the role of COPI complexes in influenza virus infection.

Authors:  Eileen Sun; Jiang He; Xiaowei Zhuang
Journal:  J Virol       Date:  2012-12-19       Impact factor: 5.103

10.  The Kap60-Kap95 karyopherin complex directly regulates phosphatidylcholine synthesis.

Authors:  Melissa A MacKinnon; Amy J Curwin; Gerard J Gaspard; Alison B Suraci; J Pedro Fernández-Murray; Christopher R McMaster
Journal:  J Biol Chem       Date:  2009-01-13       Impact factor: 5.157

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