Literature DB >> 18406002

Methods and implementation of a central biosample and data management in a three-centre clinical study.

Aniela Angelow1, Matthias Schmidt, Kerstin Weitmann, Susanne Schwedler, Hannes Vogt, Christoph Havemann, Wolfgang Hoffmann.   

Abstract

In our report we describe concept, strategies and implementation of a central biosample and data management (CSDM) system in the three-centre clinical study of the Transregional Collaborative Research Centre "Inflammatory Cardiomyopathy - Molecular Pathogenesis and Therapy" SFB/TR 19, Germany. Following the requirements of high system resource availability, data security, privacy protection and quality assurance, a web-based CSDM was developed based on Java 2 Enterprise Edition using an Oracle database. An efficient and reliable sample documentation system using bar code labelling, a partitioning storage algorithm and an online documentation software was implemented. An online electronic case report form is used to acquire patient-related data. Strict rules for access to the online applications and secure connections are used to account for privacy protection and data security. Challenges for the implementation of the CSDM resided at project, technical and organisational level as well as at staff level.

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Year:  2008        PMID: 18406002     DOI: 10.1016/j.cmpb.2008.02.002

Source DB:  PubMed          Journal:  Comput Methods Programs Biomed        ISSN: 0169-2607            Impact factor:   5.428


  8 in total

1.  Integrating clinical information in National Biobank of Korea.

Authors:  Hangchan Kim; Byoung-Kee Yi; Il Kon Kim; Yun Sik Kwak
Journal:  J Med Syst       Date:  2009-12-09       Impact factor: 4.460

2.  IT Infrastructure Components for Biobanking.

Authors:  H U Prokosch; A Beck; T Ganslandt; M Hummel; M Kiehntopf; U Sax; F Uckert; S Semler
Journal:  Appl Clin Inform       Date:  2010-11-24       Impact factor: 2.342

3.  Administer and collect medical questionnaires with Google documents: a simple, safe, and free system.

Authors:  Rakib U Rayhan; Yin Zheng; Ebsan Uddin; Christian Timbol; Oluwatoyin Adewuyi; James N Baraniuk
Journal:  Appl Med Inform       Date:  2013

4.  Multicenter data acquisition made easy.

Authors:  Jacob Rosenberg; Nadia Abdelaal Henriksen; Lars Nannestad Jørgensen
Journal:  Trials       Date:  2010-04-30       Impact factor: 2.279

5.  Leveraging a clinical research information system to assist biospecimen data and workflow management: a hybrid approach.

Authors:  Prakash M Nadkarni; Rowena Kemp; Chirag R Parikh
Journal:  J Clin Bioinforma       Date:  2011-08-25

Review 6.  NGS technologies for analyzing germplasm diversity in genebanks.

Authors:  Benjamin Kilian; Andreas Graner
Journal:  Brief Funct Genomics       Date:  2012-01-17       Impact factor: 4.241

7.  Pseudonymization for research data collection: is the juice worth the squeeze?

Authors:  Florian Kohlmayer; Ronald Lautenschläger; Fabian Prasser
Journal:  BMC Med Inform Decis Mak       Date:  2019-09-04       Impact factor: 2.796

8.  The Informatics Challenges Facing Biobanks: A Perspective from a United Kingdom Biobanking Network.

Authors:  Philip R Quinlan; Martin Groves; Lee B Jordan; Hilary Stobart; Colin A Purdie; Alastair M Thompson
Journal:  Biopreserv Biobank       Date:  2015-09-29       Impact factor: 2.300

  8 in total

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