Literature DB >> 18398050

Histone acetylation and chromatin remodeling are required for UV-B-dependent transcriptional activation of regulated genes in maize.

Paula Casati1, Mabel Campi, Feixia Chu, Nagi Suzuki, David Maltby, Shenheng Guan, Alma L Burlingame, Virginia Walbot.   

Abstract

The nuclear proteomes of maize (Zea mays) lines that differ in UV-B tolerance were compared by two-dimensional gel electrophoresis after UV light treatment. Differential accumulation of chromatin proteins, particularly histones, constituted the largest class identified by mass spectrometry. UV-B-tolerant landraces and the B73 inbred line show twice as many protein changes as the UV-B-sensitive b, pl W23 inbred line and transgenic maize expressing RNA interference constructs directed against chromatin factors. Mass spectrometic analysis of posttranslational modifications on histone proteins demonstrates that UV-B-tolerant lines exhibit greater acetylation on N-terminal tails of histones H3 and H4 after irradiation. These acetylated histones are enriched in the promoter and transcribed regions of the two UV-B-upregulated genes examined; radiation-sensitive lines lack this enrichment. DNase I and micrococcal nuclease hypersensitivity assays indicate that chromatin adopts looser structures around the selected genes in the UV-B-tolerant samples. Chromatin immunoprecipitation experiments identified additional chromatin factor changes associated with the nfc102 test gene after UV-B treatment in radiation-tolerant lines. Chromatin remodeling is thus shown to be a key process in acclimation to UV-B, and lines deficient in this process are more sensitive to UV-B.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18398050      PMCID: PMC2390752          DOI: 10.1105/tpc.107.056457

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  38 in total

Review 1.  Histone acetylation: a switch between repressive and permissive chromatin. Second in review series on chromatin dynamics.

Authors:  Anton Eberharter; Peter B Becker
Journal:  EMBO Rep       Date:  2002-03       Impact factor: 8.807

Review 2.  Impacts of solar ultraviolet-B radiation on terrestrial ecosystems of Tierra del Fuego (southern Argentina). An overview of recent progress.

Authors:  C L Ballaré; M C Rousseau; P S Searles; J G Zaller; C V Giordano; T M Robson; M M Caldwell; O E Sala; A L Scopel
Journal:  J Photochem Photobiol B       Date:  2001-09-01       Impact factor: 6.252

3.  Genome-wide analysis of gene expression reveals function of the bZIP transcription factor HY5 in the UV-B response of Arabidopsis.

Authors:  Roman Ulm; Alexander Baumann; Attila Oravecz; Zoltán Máté; Eva Adám; Edward J Oakeley; Eberhard Schäfer; Ferenc Nagy
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-22       Impact factor: 11.205

4.  Functional significance and induction by solar radiation of ultraviolet-absorbing sunscreens in field-grown soybean crops.

Authors:  C A Mazza; H E Boccalandro; C V Giordano; D Battista; A L Scopel; C L Ballaré
Journal:  Plant Physiol       Date:  2000-01       Impact factor: 8.340

Review 5.  In and out: histone variant exchange in chromatin.

Authors:  Jingji Jin; Yong Cai; Bing Li; Ronald C Conaway; Jerry L Workman; Joan Weliky Conaway; Thomas Kusch
Journal:  Trends Biochem Sci       Date:  2005-10-28       Impact factor: 13.807

Review 6.  Chromatin structure and analysis of mechanisms of activators and repressors.

Authors:  R T Simpson
Journal:  Methods       Date:  1998-08       Impact factor: 3.608

7.  Characterization of Arabidopsis photolyase enzymes and analysis of their role in protection from ultraviolet-B radiation.

Authors:  Wanda M Waterworth; Qing Jiang; Christopher E West; M Nikaido; Clifford M Bray
Journal:  J Exp Bot       Date:  2002-05       Impact factor: 6.992

8.  Gene expression profiling in response to ultraviolet radiation in maize genotypes with varying flavonoid content.

Authors:  Paula Casati; Virginia Walbot
Journal:  Plant Physiol       Date:  2003-08       Impact factor: 8.340

9.  Cluster analysis and display of genome-wide expression patterns.

Authors:  M B Eisen; P T Spellman; P O Brown; D Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-08       Impact factor: 11.205

10.  A UV-B-specific signaling component orchestrates plant UV protection.

Authors:  Bobby A Brown; Catherine Cloix; Guang Huai Jiang; Eirini Kaiserli; Pawel Herzyk; Daniel J Kliebenstein; Gareth I Jenkins
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-05       Impact factor: 11.205

View more
  40 in total

1.  Quantitative mass spectrometry reveals the epigenome as a target of arsenic.

Authors:  Feixia Chu; Xuefeng Ren; Amanda Chasse; Taylor Hickman; Luoping Zhang; Jessica Yuh; Martyn T Smith; Alma L Burlingame
Journal:  Chem Biol Interact       Date:  2010-11-12       Impact factor: 5.192

Review 2.  Plant response to stress meets dedifferentiation.

Authors:  Gideon Grafi; Vered Chalifa-Caspi; Tal Nagar; Inbar Plaschkes; Simon Barak; Vanessa Ransbotyn
Journal:  Planta       Date:  2011-02-11       Impact factor: 4.116

Review 3.  The UV-B photoreceptor UVR8: from structure to physiology.

Authors:  Gareth I Jenkins
Journal:  Plant Cell       Date:  2014-01-30       Impact factor: 11.277

4.  Integrated Physiological, Proteomic, and Metabolomic Analysis of Ultra Violet (UV) Stress Responses and Adaptation Mechanisms in Pinus radiata.

Authors:  Jesús Pascual; María Jesús Cañal; Mónica Escandón; Mónica Meijón; Wolfram Weckwerth; Luis Valledor
Journal:  Mol Cell Proteomics       Date:  2017-01-17       Impact factor: 5.911

5.  Mutator transposon activation after UV-B involves chromatin remodeling.

Authors:  Julia I Qüesta; Virginia Walbot; Paula Casati
Journal:  Epigenetics       Date:  2010-05-10       Impact factor: 4.528

6.  Evidence of physiological phototropin1 (phot1) action in response to UV-C illumination.

Authors:  Melissa Hamner Magerøy; Erin H Kowalik; Kevin M Folta; James Shinkle
Journal:  Plant Signal Behav       Date:  2010-10-01

7.  The WD40-repeat proteins NFC101 and NFC102 regulate different aspects of maize development through chromatin modification.

Authors:  Iride Mascheretti; Raffaella Battaglia; Davide Mainieri; Andrea Altana; Massimiliano Lauria; Vincenzo Rossi
Journal:  Plant Cell       Date:  2013-02-19       Impact factor: 11.277

8.  Transgenerational inheritance and resetting of stress-induced loss of epigenetic gene silencing in Arabidopsis.

Authors:  Christina Lang-Mladek; Olga Popova; Kathrin Kiok; Marc Berlinger; Branislava Rakic; Werner Aufsatz; Claudia Jonak; Marie-Theres Hauser; Christian Luschnig
Journal:  Mol Plant       Date:  2010-04-21       Impact factor: 13.164

9.  Arabidopsis FHY3 and HY5 positively mediate induction of COP1 transcription in response to photomorphogenic UV-B light.

Authors:  Xi Huang; Xinhao Ouyang; Panyu Yang; On Sun Lau; Gang Li; Jigang Li; Haodong Chen; Xing Wang Deng
Journal:  Plant Cell       Date:  2012-11-13       Impact factor: 11.277

10.  ANTI-SILENCING FUNCTION1 proteins are involved in ultraviolet-induced DNA damage repair and are cell cycle regulated by E2F transcription factors in Arabidopsis.

Authors:  Luciana D Lario; Elena Ramirez-Parra; Crisanto Gutierrez; Claudia P Spampinato; Paula Casati
Journal:  Plant Physiol       Date:  2013-04-17       Impact factor: 8.340

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.