Literature DB >> 18391208

Probing microscopic origins of confined subdiffusion by first-passage observables.

S Condamin1, V Tejedor, R Voituriez, O Bénichou, J Klafter.   

Abstract

Subdiffusive motion of tracer particles in complex crowded environments, such as biological cells, has been shown to be widespread. This deviation from Brownian motion is usually characterized by a sublinear time dependence of the mean square displacement (MSD). However, subdiffusive behavior can stem from different microscopic scenarios that cannot be identified solely by the MSD data. In this article we present a theoretical framework that permits the analytical calculation of first-passage observables (mean first-passage times, splitting probabilities, and occupation times distributions) in disordered media in any dimensions. This analysis is applied to two representative microscopic models of subdiffusion: continuous-time random walks with heavy tailed waiting times and diffusion on fractals. Our results show that first-passage observables provide tools to unambiguously discriminate between the two possible microscopic scenarios of subdiffusion. Moreover, we suggest experiments based on first-passage observables that could help in determining the origin of subdiffusion in complex media, such as living cells, and discuss the implications of anomalous transport to reaction kinetics in cells.

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Year:  2008        PMID: 18391208      PMCID: PMC2311379          DOI: 10.1073/pnas.0712158105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

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6.  First-passage time distributions for subdiffusion in confined geometry.

Authors:  S Condamin; O Bénichou; J Klafter
Journal:  Phys Rev Lett       Date:  2007-06-22       Impact factor: 9.161

7.  Subdiffusion and weak ergodicity breaking in the presence of a reactive boundary.

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8.  First-passage times for random walks in bounded domains.

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  34 in total

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6.  Quantitative analysis of single particle trajectories: mean maximal excursion method.

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10.  Actin polymerization driven mitochondrial transport in mating S. cerevisiae.

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Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-22       Impact factor: 11.205

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