Literature DB >> 18391197

TFIID component TAF7 functionally interacts with both TFIIH and P-TEFb.

Anne Gegonne1, Jocelyn D Weissman, Hanxin Lu, Meisheng Zhou, Arindam Dasgupta, Robert Ribble, John N Brady, Dinah S Singer.   

Abstract

Transcription consists of a series of highly regulated steps: assembly of the preinitiation complex (PIC) at the promoter, initiation, elongation, and termination. PIC assembly is nucleated by TFIID, a complex composed of the TATA-binding protein (TBP) and a series of TBP-associated factors (TAFs). One component, TAF7, is incorporated in the PIC through its interaction with TFIID but is released from TFIID upon transcription initiation. We now report that TAF7 interacts with the transcription factors, TFIIH and P-TEFb, resulting in the inhibition of their Pol II CTD kinase activities. Importantly, in in vitro transcription reactions, TAF7 inhibits steps after PIC assembly and formation of the first phosphodiester bonds. Further, in vivo TAF7 coelongates with P-TEFb and Pol II downstream of the promoter. We propose a model in which TAF7 contributes to the regulation of the transition from PIC assembly to initiation and elongation.

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Year:  2008        PMID: 18391197      PMCID: PMC2291086          DOI: 10.1073/pnas.0801637105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  TAF(II)250-independent transcription can be conferred on a TAF(II)250-dependent basal promoter by upstream activators.

Authors:  J D Weissman; T K Howcroft; D S Singer
Journal:  J Biol Chem       Date:  2000-04-07       Impact factor: 5.157

2.  Positive transcription elongation factor B phosphorylates hSPT5 and RNA polymerase II carboxyl-terminal domain independently of cyclin-dependent kinase-activating kinase.

Authors:  J B Kim; P A Sharp
Journal:  J Biol Chem       Date:  2001-01-05       Impact factor: 5.157

3.  A transcription reinitiation intermediate that is stabilized by activator.

Authors:  N Yudkovsky; J A Ranish; S Hahn
Journal:  Nature       Date:  2000-11-09       Impact factor: 49.962

Review 4.  The RNA polymerase II machinery: structure illuminates function.

Authors:  Nancy A Woychik; Michael Hampsey
Journal:  Cell       Date:  2002-02-22       Impact factor: 41.582

5.  Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription.

Authors:  P Komarnitsky; E J Cho; S Buratowski
Journal:  Genes Dev       Date:  2000-10-01       Impact factor: 11.361

6.  Dynamic association of capping enzymes with transcribing RNA polymerase II.

Authors:  S C Schroeder; B Schwer; S Shuman; D Bentley
Journal:  Genes Dev       Date:  2000-10-01       Impact factor: 11.361

Review 7.  Regulation of transcription elongation by phosphorylation.

Authors:  Michael S Kobor; Jack Greenblatt
Journal:  Biochim Biophys Acta       Date:  2002-09-13

Review 8.  New problems in RNA polymerase II transcription initiation: matching the diversity of core promoters with a variety of promoter recognition factors.

Authors:  Ferenc Müller; Màté A Demény; Làszlò Tora
Journal:  J Biol Chem       Date:  2007-03-29       Impact factor: 5.157

9.  TAFII55 binding to TAFII250 inhibits its acetyltransferase activity.

Authors:  A Gegonne; J D Weissman; D S Singer
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-09       Impact factor: 11.205

10.  TFIIH inhibits CDK9 phosphorylation during human immunodeficiency virus type 1 transcription.

Authors:  M Zhou; S Nekhai; D C Bharucha; A Kumar; H Ge; D H Price; J M Egly; J N Brady
Journal:  J Biol Chem       Date:  2001-09-25       Impact factor: 5.157

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  27 in total

1.  The general transcription factor TAF7 is essential for embryonic development but not essential for the survival or differentiation of mature T cells.

Authors:  Anne Gegonne; Xuguang Tai; Jinghui Zhang; Gang Wu; Jianjian Zhu; Aki Yoshimoto; Jeffrey Hanson; Constance Cultraro; Qing-Rong Chen; Terry Guinter; Zhihui Yang; Karen Hathcock; Alfred Singer; Jaime Rodriguez-Canales; Lino Tessarollo; Susan Mackem; Daoud Meerzaman; Ken Buetow; Dinah S Singer
Journal:  Mol Cell Biol       Date:  2012-03-12       Impact factor: 4.272

2.  Novel functions for TAF7, a regulator of TAF1-independent transcription.

Authors:  Ballachanda N Devaiah; Hanxin Lu; Anne Gegonne; Zeynep Sercan; Hongen Zhang; Robert J Clifford; Maxwell P Lee; Dinah S Singer
Journal:  J Biol Chem       Date:  2010-10-11       Impact factor: 5.157

3.  Transcriptional response to stress in the dynamic chromatin environment of cycling and mitotic cells.

Authors:  Anniina Vihervaara; Christian Sergelius; Jenni Vasara; Malin A H Blom; Alexandra N Elsing; Pia Roos-Mattjus; Lea Sistonen
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-19       Impact factor: 11.205

4.  Cross-talk among RNA polymerase II kinases modulates C-terminal domain phosphorylation.

Authors:  Ballachanda N Devaiah; Dinah S Singer
Journal:  J Biol Chem       Date:  2012-10-01       Impact factor: 5.157

Review 5.  TAF7: traffic controller in transcription initiation.

Authors:  Anne Gegonne; Ballachanda N Devaiah; Dinah S Singer
Journal:  Transcription       Date:  2013 Jan-Feb

6.  Lysine Demethylase 5A Is Required for MYC-Driven Transcription in Multiple Myeloma.

Authors:  Hiroto Ohguchi; Paul M C Park; Tingjian Wang; Berkley E Gryder; Daisuke Ogiya; Keiji Kurata; Xiaofeng Zhang; Deyao Li; Chengkui Pei; Takeshi Masuda; Catrine Johansson; Virangika K Wimalasena; Yong Kim; Shinjiro Hino; Shingo Usuki; Yawara Kawano; Mehmet K Samur; Yu-Tzu Tai; Nikhil C Munshi; Masao Matsuoka; Sumio Ohtsuki; Mitsuyoshi Nakao; Takashi Minami; Shannon Lauberth; Javed Khan; Udo Oppermann; Adam D Durbin; Kenneth C Anderson; Teru Hideshima; Jun Qi
Journal:  Cancer Discov       Date:  2021-04-10       Impact factor: 39.397

7.  BRD4 is an atypical kinase that phosphorylates serine2 of the RNA polymerase II carboxy-terminal domain.

Authors:  Ballachanda N Devaiah; Brian A Lewis; Natasha Cherman; Michael C Hewitt; Brian K Albrecht; Pamela G Robey; Keiko Ozato; Robert J Sims; Dinah S Singer
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-16       Impact factor: 11.205

8.  Progranulin (granulin/epithelin precursor) and its constituent granulin repeats repress transcription from cellular promoters.

Authors:  Mainul Hoque; Michael B Mathews; Tsafi Pe'ery
Journal:  J Cell Physiol       Date:  2010-04       Impact factor: 6.384

9.  Genome-wide localization analysis of a complete set of Tafs reveals a specific effect of the taf1 mutation on Taf2 occupancy and provides indirect evidence for different TFIID conformations at different promoters.

Authors:  Kazushige Ohtsuki; Koji Kasahara; Katsuhiko Shirahige; Tetsuro Kokubo
Journal:  Nucleic Acids Res       Date:  2009-12-21       Impact factor: 16.971

10.  TFIID Enables RNA Polymerase II Promoter-Proximal Pausing.

Authors:  Charli B Fant; Cecilia B Levandowski; Kapil Gupta; Zachary L Maas; John Moir; Jonathan D Rubin; Andrew Sawyer; Meagan N Esbin; Jenna K Rimel; Olivia Luyties; Michael T Marr; Imre Berger; Robin D Dowell; Dylan J Taatjes
Journal:  Mol Cell       Date:  2020-03-30       Impact factor: 17.970

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