Literature DB >> 17395580

New problems in RNA polymerase II transcription initiation: matching the diversity of core promoters with a variety of promoter recognition factors.

Ferenc Müller1, Màté A Demény, Làszlò Tora.   

Abstract

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Year:  2007        PMID： 17395580     DOI： 10.1074/jbc.R700012200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN： 0021-9258            Impact factor:   5.157


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  56 in total

1.  The general transcription factor TAF7 is essential for embryonic development but not essential for the survival or differentiation of mature T cells.

Authors:  Anne Gegonne; Xuguang Tai; Jinghui Zhang; Gang Wu; Jianjian Zhu; Aki Yoshimoto; Jeffrey Hanson; Constance Cultraro; Qing-Rong Chen; Terry Guinter; Zhihui Yang; Karen Hathcock; Alfred Singer; Jaime Rodriguez-Canales; Lino Tessarollo; Susan Mackem; Daoud Meerzaman; Ken Buetow; Dinah S Singer
Journal:  Mol Cell Biol       Date:  2012-03-12       Impact factor: 4.272

2.  Human glycolipid transfer protein gene (GLTP) expression is regulated by Sp1 and Sp3: involvement of the bioactive sphingolipid ceramide.

Authors:  Xianqiong Zou; Yongguang Gao; Vivian R Ruvolo; Tawnya L Gardner; Peter P Ruvolo; Rhoderick E Brown
Journal:  J Biol Chem       Date:  2010-10-25       Impact factor: 5.157

3.  A code for transcription initiation in mammalian genomes.

Authors:  Martin C Frith; Eivind Valen; Anders Krogh; Yoshihide Hayashizaki; Piero Carninci; Albin Sandelin
Journal:  Genome Res       Date:  2007-11-21       Impact factor: 9.043

4.  Binding of ICP4, TATA-binding protein, and RNA polymerase II to herpes simplex virus type 1 immediate-early, early, and late promoters in virus-infected cells.

Authors:  Padmavathi Sampath; Neal A Deluca
Journal:  J Virol       Date:  2007-12-19       Impact factor: 5.103

5.  Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE.

Authors:  Eivind Valen; Giovanni Pascarella; Alistair Chalk; Norihiro Maeda; Miki Kojima; Chika Kawazu; Mitsuyoshi Murata; Hiromi Nishiyori; Dejan Lazarevic; Dario Motti; Troels Torben Marstrand; Man-Hung Eric Tang; Xiaobei Zhao; Anders Krogh; Ole Winther; Takahiro Arakawa; Jun Kawai; Christine Wells; Carsten Daub; Matthias Harbers; Yoshihide Hayashizaki; Stefano Gustincich; Albin Sandelin; Piero Carninci
Journal:  Genome Res       Date:  2008-12-11       Impact factor: 9.043

Review 6.  The RNA polymerase II core promoter - the gateway to transcription.

Authors:  Tamar Juven-Gershon; Jer-Yuan Hsu; Joshua Wm Theisen; James T Kadonaga
Journal:  Curr Opin Cell Biol       Date:  2008-04-22       Impact factor: 8.382

7.  Two distinct roles of ARABIDOPSIS HOMOLOG OF TRITHORAX1 (ATX1) at promoters and within transcribed regions of ATX1-regulated genes.

Authors:  Yong Ding; Zoya Avramova; Michael Fromm
Journal:  Plant Cell       Date:  2011-01-25       Impact factor: 11.277

Review 8.  Gene-specific transcription activation via long-range allosteric shape-shifting.

Authors:  Chung-Jung Tsai; Ruth Nussinov
Journal:  Biochem J       Date:  2011-10-01       Impact factor: 3.857

9.  Maneuver at the transcription start site: Mot1p and NC2 navigate TFIID/TBP to specific core promoter elements.

Authors:  Zhuo Zhou; I-Ju Lin; Russell P Darst; Jörg Bungert
Journal:  Epigenetics       Date:  2009-01-27       Impact factor: 4.528

10.  TATA binding proteins can recognize nontraditional DNA sequences.

Authors:  Sunmin Ahn; Chia-Ling Huang; Emre Ozkumur; Xirui Zhang; Jyothsna Chinnala; Ayca Yalcin; Sabita Bandyopadhyay; Shelly Russek; M Selim Unlü; Charles DeLisi; Rostem J Irani
Journal:  Biophys J       Date:  2012-10-02       Impact factor: 4.033
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