Literature DB >> 18390597

Single-molecule force spectroscopy reveals a stepwise unfolding of Caenorhabditis elegans giant protein kinase domains.

Dina N Greene1, Tzintzuni Garcia, R Bryan Sutton, Kim M Gernert, Guy M Benian, Andres F Oberhauser.   

Abstract

Myofibril assembly and disassembly are complex processes that regulate overall muscle mass. Titin kinase has been implicated as an initiating catalyst in signaling pathways that ultimately result in myofibril growth. In titin, the kinase domain is in an ideal position to sense mechanical strain that occurs during muscle activity. The enzyme is negatively regulated by intramolecular interactions occurring between the kinase catalytic core and autoinhibitory/regulatory region. Molecular dynamics simulations suggest that human titin kinase acts as a force sensor. However, the precise mechanism(s) resulting in the conformational changes that relieve the kinase of this autoinhibition are unknown. Here we measured the mechanical properties of the kinase domain and flanking Ig/Fn domains of the Caenorhabditis elegans titin-like proteins twitchin and TTN-1 using single-molecule atomic force microscopy. Our results show that these kinase domains have significant mechanical resistance, unfolding at forces similar to those for Ig/Fn beta-sandwich domains (30-150 pN). Further, our atomic force microscopy data is consistent with molecular dynamic simulations, which show that these kinases unfold in a stepwise fashion, first an unwinding of the autoinhibitory region, followed by a two-step unfolding of the catalytic core. These data support the hypothesis that titin kinase may function as an effective force sensor.

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Year:  2008        PMID: 18390597      PMCID: PMC2479574          DOI: 10.1529/biophysj.108.130237

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  43 in total

Review 1.  Mechanical design of proteins studied by single-molecule force spectroscopy and protein engineering.

Authors:  M Carrion-Vazquez; A F Oberhauser; T E Fisher; P E Marszalek; H Li; J M Fernandez
Journal:  Prog Biophys Mol Biol       Date:  2000       Impact factor: 3.667

2.  Can non-mechanical proteins withstand force? Stretching barnase by atomic force microscopy and molecular dynamics simulation.

Authors:  R B Best; B Li; A Steward; V Daggett; J Clarke
Journal:  Biophys J       Date:  2001-10       Impact factor: 4.033

3.  Activation of calcium/calmodulin regulated kinases.

Authors:  M Wilmann; M Gautel; O Mayans
Journal:  Cell Mol Biol (Noisy-le-grand)       Date:  2000-07       Impact factor: 1.770

4.  Insights into autoregulation from the crystal structure of twitchin kinase.

Authors:  S H Hu; M W Parker; J Y Lei; M C Wilce; G M Benian; B E Kemp
Journal:  Nature       Date:  1994-06-16       Impact factor: 49.962

5.  Additional sequence complexity in the muscle gene, unc-22, and its encoded protein, twitchin, of Caenorhabditis elegans.

Authors:  G M Benian; S W L'Hernault; M E Morris
Journal:  Genetics       Date:  1993-08       Impact factor: 4.562

6.  The mechanical hierarchies of fibronectin observed with single-molecule AFM.

Authors:  Andres F Oberhauser; Carmelu Badilla-Fernandez; Mariano Carrion-Vazquez; Julio M Fernandez
Journal:  J Mol Biol       Date:  2002-05-31       Impact factor: 5.469

7.  cAMP-dependent phosphorylation of Aplysia twitchin may mediate modulation of muscle contractions by neuropeptide cotransmitters.

Authors:  W C Probst; E C Cropper; J Heierhorst; S L Hooper; H Jaffe; F Vilim; S Beushausen; I Kupfermann; K R Weiss
Journal:  Proc Natl Acad Sci U S A       Date:  1994-08-30       Impact factor: 11.205

8.  Protein kinase domain of twitchin has protein kinase activity and an autoinhibitory region.

Authors:  J Lei; X Tang; T C Chambers; J Pohl; G M Benian
Journal:  J Biol Chem       Date:  1994-08-19       Impact factor: 5.157

9.  Towards a molecular understanding of titin.

Authors:  S Labeit; M Gautel; A Lakey; J Trinick
Journal:  EMBO J       Date:  1992-05       Impact factor: 11.598

10.  Stepwise unfolding of titin under force-clamp atomic force microscopy.

Authors:  A F Oberhauser; P K Hansma; M Carrion-Vazquez; J M Fernandez
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-09       Impact factor: 11.205

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  19 in total

1.  Deconvolution of dynamic mechanical networks.

Authors:  Michael Hinczewski; Yann von Hansen; Roland R Netz
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-30       Impact factor: 11.205

2.  A force-activated kinase in a catch smooth muscle.

Authors:  Thomas M Butler; Marion J Siegman
Journal:  J Muscle Res Cell Motil       Date:  2011-02-01       Impact factor: 2.698

3.  Mechanoenzymatics of titin kinase.

Authors:  Elias M Puchner; Alexander Alexandrovich; Ay Lin Kho; Ulf Hensen; Lars V Schäfer; Birgit Brandmeier; Frauke Gräter; Helmut Grubmüller; Hermann E Gaub; Mathias Gautel
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-02       Impact factor: 11.205

Review 4.  Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy.

Authors:  Keir C Neuman; Attila Nagy
Journal:  Nat Methods       Date:  2008-06       Impact factor: 28.547

5.  Single-molecule force spectroscopy reveals the individual mechanical unfolding pathways of a surface layer protein.

Authors:  Christine Horejs; Robin Ristl; Rupert Tscheliessnig; Uwe B Sleytr; Dietmar Pum
Journal:  J Biol Chem       Date:  2011-06-19       Impact factor: 5.157

6.  Extensive and modular intrinsically disordered segments in C. elegans TTN-1 and implications in filament binding, elasticity and oblique striation.

Authors:  Jeffrey G Forbes; Denise B Flaherty; Kan Ma; Hiroshi Qadota; Guy M Benian; Kuan Wang
Journal:  J Mol Biol       Date:  2010-03-25       Impact factor: 5.469

7.  Substrate elasticity provides mechanical signals for the expansion of hemopoietic stem and progenitor cells.

Authors:  Jeff Holst; Sarah Watson; Megan S Lord; Steven S Eamegdool; Daniel V Bax; Lisa B Nivison-Smith; Alexey Kondyurin; Liang Ma; Andres F Oberhauser; Anthony S Weiss; John E J Rasko
Journal:  Nat Biotechnol       Date:  2010-10-03       Impact factor: 54.908

8.  Identification of an N-terminal inhibitory extension as the primary mechanosensory regulator of twitchin kinase.

Authors:  Eleonore von Castelmur; Johan Strümpfer; Barbara Franke; Julijus Bogomolovas; Sonia Barbieri; Hiroshi Qadota; Petr V Konarev; Dmitri I Svergun; Siegfried Labeit; Guy M Benian; Klaus Schulten; Olga Mayans
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-06       Impact factor: 11.205

Review 9.  Conditionally and transiently disordered proteins: awakening cryptic disorder to regulate protein function.

Authors:  Ursula Jakob; Richard Kriwacki; Vladimir N Uversky
Journal:  Chem Rev       Date:  2014-02-06       Impact factor: 60.622

10.  Tracking unfolding and refolding reactions of single proteins using atomic force microscopy methods.

Authors:  Paul J Bujalowski; Andres F Oberhauser
Journal:  Methods       Date:  2013-03-20       Impact factor: 3.608

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