Literature DB >> 18386897

A peptoid "antibody surrogate" that antagonizes VEGF receptor 2 activity.

D Gomika Udugamasooriya1, Sean P Dineen, Rolf A Brekken, Thomas Kodadek.   

Abstract

We report a two-color, cell-based screen to identify specific receptor-binding compounds in a combinatorial library of peptoids displayed on beads. We apply this strategy to the isolation of vascular endothelial growth factor receptor 2 (VEGFR2)-binding peptoids. A dimeric derivative of one of these lead compounds is shown to be an antagonist of VEGFR2 activity both in vitro and in vivo. This methodology provides a potentially general route to synthetic molecules that bind integral membrane receptors with affinities and specificities similar to those of antibodies, but which are far smaller and easier to make and manipulate.

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Year:  2008        PMID: 18386897     DOI: 10.1021/ja711193x

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  85 in total

Review 1.  Chemistry and biology of orexin signaling.

Authors:  Thomas Kodadek; Di Cai
Journal:  Mol Biosyst       Date:  2010-06-07

2.  Expanded polyglutamine-binding peptoid as a novel therapeutic agent for treatment of Huntington's disease.

Authors:  Xuesong Chen; Jun Wu; Yuan Luo; Xia Liang; Charlene Supnet; Mee Whi Kim; Gregor P Lotz; Guocheng Yang; Paul J Muchowski; Thomas Kodadek; Ilya Bezprozvanny
Journal:  Chem Biol       Date:  2011-09-23

3.  Construction of peptoids with all trans-amide backbones and peptoid reverse turns via the tactical incorporation of N-aryl side chains capable of hydrogen bonding.

Authors:  Joseph R Stringer; J Aaron Crapster; Ilia A Guzei; Helen E Blackwell
Journal:  J Org Chem       Date:  2010-09-17       Impact factor: 4.354

4.  Fragmentation Patterns and Mechanisms of Singly and Doubly Protonated Peptoids Studied by Collision Induced Dissociation.

Authors:  Jianhua Ren; Yuan Tian; Ekram Hossain; Michael D Connolly
Journal:  J Am Soc Mass Spectrom       Date:  2016-02-01       Impact factor: 3.109

Review 5.  Combinatorial peptide libraries: mining for cell-binding peptides.

Authors:  Bethany Powell Gray; Kathlynn C Brown
Journal:  Chem Rev       Date:  2013-12-03       Impact factor: 60.622

6.  Screening one bead one compound libraries against serum using a flow cytometer: Determination of the minimum antibody concentration required for ligand discovery.

Authors:  Osayemwenre Erharuyi; Scott Simanski; Patrick J McEnaney; Thomas Kodadek
Journal:  Bioorg Med Chem Lett       Date:  2018-01-31       Impact factor: 2.823

7.  Aβ42-binding peptoids as amyloid aggregation inhibitors and detection ligands.

Authors:  Yuan Luo; Sheetal Vali; Suya Sun; Xuesong Chen; Xia Liang; Tatiana Drozhzhina; Elena Popugaeva; Ilya Bezprozvanny
Journal:  ACS Chem Neurosci       Date:  2013-03-07       Impact factor: 4.418

8.  Small-molecule inhibitors of the interaction between the E3 ligase VHL and HIF1α.

Authors:  Dennis L Buckley; Jeffrey L Gustafson; Inge Van Molle; Anke G Roth; Hyun Seop Tae; Peter C Gareiss; William L Jorgensen; Alessio Ciulli; Craig M Crews
Journal:  Angew Chem Int Ed Engl       Date:  2012-10-12       Impact factor: 15.336

9.  Synthesis and screening of stereochemically diverse combinatorial libraries of peptide tertiary amides.

Authors:  Yu Gao; Thomas Kodadek
Journal:  Chem Biol       Date:  2013-03-21

10.  Discovery of peptoid ligands for anti-aquaporin 4 antibodies.

Authors:  Bindu L Raveendra; Hao Wu; Roberto Baccala; M Muralidhar Reddy; Jessica Schilke; Jeffrey L Bennett; Argyrios N Theofilopoulos; Thomas Kodadek
Journal:  Chem Biol       Date:  2013-03-21
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