| Literature DB >> 18385784 |
Behnaz Bayat1, Shahin Yazdani, Afagh Alavi, Mohsen Chiani, Fereshteh Chitsazian, Betsabeh Khoramian Tusi, Fatemeh Suri, Mehrnaz Narooie-Nejhad, Mohammad H Sanati, Elahe Elahi.
Abstract
PURPOSE: To investigate the role of MYOC and CYP1B1 in Iranian juvenile open angle glaucoma (JOAG) patients.Entities:
Mesh:
Substances:
Year: 2008 PMID: 18385784 PMCID: PMC2268862
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Phenotypic features of Iranian JOAG patients.
| JG104# | S | 14 years | 0.3/0.6 | 30/34 | 1x | H1, H2* | ||
| JG120 | S | 40 years | 0.6/0.6 | 40/40 | 1x | H1, H1* | ||
| JG123# | S | 17 years | 0.3/0.4 | 22/29 | 1x | H1, H1* | ||
| JG127 | S | 32 years | 0.3/0.3 | 30/30 | 1x | H1, H1* | ||
| JG130# | S | 14 years | 0.3/0.5 | 20/30 | 1x | H1, H2* | ||
| JG113 | F | AD | 40 years | 0.5/0.9 | multiple | 5–40 years | H2, H3 | |
| JG117 | F | AD | 17 years | 0.9/0.4 | 34/34 | 1x | 17–22 years | H2, H3 |
| JG118 | F | AD | 17 years | 33/33 | 2x | Birth-60 years | H1, H1* | |
| JG121 | F | AD | 27 years | 0.3/0.4 | 33/34 | 1x | 27–58 years | H1, H2* |
| JG101 | F | AR | 16 years | 0.6/0.3 | 33/34 | 2x | Birth-22 years | H1, H2* |
| JG103## | F | AR | 19 years | 0.5/0.5 | /33 | 1x | 19–20 years | H1, H3 or
H2, H4 |
| JG105 | F | AR | 24 years | normal/33 | 1x | 24–29 years | H2, H2* | |
| JG107 | F | AR | 10 years | 0.3/0.3 | 1x | H2, H2* | ||
| JG111 | F | AR | 32 years | high/high | 2x | 32–36 years | H1, H2* | |
| JG114## | F | AR | 18 years | 0.3/0.3 | 1x | 5–30 years | H3, H3* | |
| JG129## | F | AR | L: birth
R: 12 years | 0.6/0.3 | 30/ | Birth-12 years | H1, H1* | |
| JG131 | F | AR | L: 12 years
R: birth | 0.5/0.3 | 28/24 | 1x | Birth-45 years | H1, H4 |
| JG100## | F | ? | 10 years | 0.5/0.6 | 35/35 | 3x | Birth-12 years | H1, H2* |
| JG102# | F | ? | 19 years | 0.5/0.3 | 33/34 | 1x | 7–20 years | H2, H2* |
| JG110 | F | ? | 14 years | 0.5/0.3 | 2x | 14–35 years | H2, H2* | |
| JG112 | F | ? | 30 years | 0.5/0.5 | 1x | 5–60 years | H1, H1* | |
| JG122 | F | ? | 25 years | 0.3/0.3 | 1x | H1, H4 | ||
| JG134 | F | ? | 30 years | 0.4/0.9 | 34/34 | H1, H4 |
Unknown clinical features are left blank. For familial cases, features of the proband of the families are presented. The meaning of each symbol and abbreviation is given in the following: F/S indicated the familial/sporadic status of patients: F, familial; S, sporadic; AD: autosomal dominant; AR: autosoamal recessive; ?: unknown mode of inheritance; R: right eye; L: left eye; Age of onset range is the range of age of onset in other affected family members; MYOC haplotypes are defined by SNPs at positions c.-83, c.227, and IVS2+35 in the same order. H1: -GGG-, H2: -GGA-, H3: -AAA-, H4: -AAG-; The sharp (hash mark) indicates patients in whom MYOC disease-associated variations were found; the double sharp indicates patients in whom CYP1B1 disease-associated variations were found; the asterisk indicates that the haplotypes of these patients were unambiguous. Those of the remaining patients were predicted.
Figure 1Iranian JOAG pedigrees. (A) JG 102: Inheritance in this pedigree does not appear to be conclusively autosomal dominant because individuals of generation I are unaffected. Autosomal recessive inheritance seemed possible because of consanguinity and extensive inbreeding in village of residence. (B) JG 103 and (C) JG 111: Autosomal recessive inheritance is suggested in these two pedigrees because of multiple affected siblings born to unaffected parents who are first cousins. (D) JG 118: Autosomal dominant inheritance is suggested in this pedigree because affected individuals are observed in three consecutive generations. The affected individuals of the last two generations each had only one affected parent.
Mode of JOAG inheritance in families of patients.
| JG104 | JG107 | JG102 | JG100 | JG113 | JG101 | JG100 |
| JG120 | JG113 | JG101 | JG117 | JG103 | JG102 | |
| JG123 | JG114 | JG103 | JG118 | JG105 | JG110 | |
| JG127 | JG117 | JG105 | JG121 | JG107 | JG112 | |
| JG130 | JG121 | JG110 | JG111 | JG122 | ||
| JG122 | JG111 | JG114 | JG134 | |||
| JG129 | JG112 | JG129 | ||||
| JG134 | JG118 | JG131 | ||||
| JG131 | ||||||
Sporadic cases are indicated in the left-most column. The next three columns separate the familial cases according to criteria by which they were classified as familial. The three right-most columns indicate mode of inheritance in each of the familial cases.
MYOC variations in Iranian JOAG patients.
| g.-83G>A | c.-83G>A | 1 | 7 (103, 113, 117,119, 122,131,134) | 1 (114) | 9 | 19.57% | |||
| 1 | 2 (123, 130) | 0 | 2 | 4.35% | |||||
| g.249G>A | c.227G>A | 1 | R76K | 7 (103, 113, 117, 119, 122, 131, 134) | 1 (114) | 9 | 19.57% | ||
| g.14072G>A | IVS2+35G>A | 2 | 6 (100, 101, 103,111, 121, 130) | 8 (102, 104, 105, 107, 110, 113, 114, 117) | 22 | 47.83% | |||
| g.16169G>A | c.975G>A | 3 | T325T | 1 (100) | 0 | 1 | 2.17% | ||
| 3 | 1 (102) | 0 | 1 | 2.17% | |||||
| 3 | 1 (104) | 0 | 1 | 2.17% | |||||
The asterisk shows that the reference sequences used were NT_004487, NM_000261, and, NP_000252. Variations thought to cause JOAG are shown in bold. The meaning of each symbol is given in the following: the sharp (hash mark) indicates that the “A” of the initiation codon was designated +1; the double sharp indicates a novel mutation.
Figure 2Novel mutations in MYOC. A: At the top, the sequence chromatogram is showing the heterozygous mutation, c.24C>A, which causes the codon change UGC to UGA, resulting in C8X; at the bottom, the chromatograph shows the wild type sequence. B: The top sequence chromatogram shows the heterozygous mutation, c.1001T>C, which is causing codon change CUU to CCU, resulting in L334P; the bottom chromatograph illustrates the wild type sequence.
Alignment of L334P in myocilin proteins.
| Gene | L334P | Seq ID |
| MYOC_ | GAVVYRGS | |
| MYOC_ | GAVVYRGS | Q2PT31 |
| MYOC_ | GAVVYWGS | AAS68633.1 |
| MYOC_ | GAVVYSGS | |
| MYOC_ | GAVVYSGN | AAO40254.1 |
| MYOC_ | GAVVYAGS | |
| MYOC_ | GAVVYAGS | |
| MYOC_ | GAVVYSGS | |
| MYOC_ | GAVVYQGS | |
| MYOC_ | GAVVYRGS | |
| MYOC_ | GATMYKGS | Q5F0G5 |
Sequence ID numbers are from the expasy server and NCBI.