Literature DB >> 18384893

Different trans RNA splicing events in bloodstream and procyclic Trypanosoma brucei.

Jared R Helm1, Mary E Wilson, John E Donelson.   

Abstract

Most trypanosomatid genes are transcribed into polycistronic precursor RNAs that are processed into monocistronic mRNAs possessing a 39-nucleotide spliced leader (SL) at their 5'-ends and polyadenylation at their 3'-ends. We show here that precursor RNA derived from a luciferase gene integrated in reverse orientation at the rDNA locus of Trypanosoma brucei is processed into three major SL-containing RNAs in bloodstream cells and a single SL-containing RNA in procyclic RNAs. This difference in trans RNA splicing between bloodstream and procyclic cells is independent of the 5'- and 3'-UTRs flanking the luciferase coding region. Thus, bloodstream cells can recognize some sequences in precursor RNA as a SL addition site that procyclic cells do not. These alternative SL addition sites may be aberrant or they might be utilized to expand the number of gene products from individual genes. Future experiments on endogenous genes will be necessary to examine the latter possibility.

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Year:  2008        PMID: 18384893      PMCID: PMC2699461          DOI: 10.1016/j.molbiopara.2008.02.006

Source DB:  PubMed          Journal:  Mol Biochem Parasitol        ISSN: 0166-6851            Impact factor:   1.759


  22 in total

1.  Analysis of a donor gene region for a variant surface glycoprotein and its expression site in African trypanosomes.

Authors:  D J LaCount; N M El-Sayed; S Kaul; D Wanless; C M Turner; J E Donelson
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

Review 2.  trans and cis splicing in trypanosomatids: mechanism, factors, and regulation.

Authors:  Xue-hai Liang; Asaf Haritan; Shai Uliel; Shulamit Michaeli
Journal:  Eukaryot Cell       Date:  2003-10

3.  A differential role for actin during the life cycle of Trypanosoma brucei.

Authors:  José A García-Salcedo; David Pérez-Morga; Purificación Gijón; Vincent Dilbeck; Etienne Pays; Derek P Nolan
Journal:  EMBO J       Date:  2004-02-12       Impact factor: 11.598

Review 4.  Post-transcriptional regulation of gene expression in trypanosomes and leishmanias.

Authors:  Christine Clayton; Michal Shapira
Journal:  Mol Biochem Parasitol       Date:  2007-07-19       Impact factor: 1.759

5.  Temporal order of RNA-processing reactions in trypanosomes: rapid trans splicing precedes polyadenylation of newly synthesized tubulin transcripts.

Authors:  E Ullu; K R Matthews; C Tschudi
Journal:  Mol Cell Biol       Date:  1993-01       Impact factor: 4.272

6.  Alternative splicing within and between alleles of the ATPase gene 1 locus of Trypanosoma brucei.

Authors:  P Revelard; S Lips; E Pays
Journal:  Mol Biochem Parasitol       Date:  1993-11       Impact factor: 1.759

7.  Expression and function of the Trypanosoma brucei major surface protease (GP63) genes.

Authors:  Douglas J LaCount; Amy E Gruszynski; Paul M Grandgenett; James D Bangs; John E Donelson
Journal:  J Biol Chem       Date:  2003-04-21       Impact factor: 5.157

8.  The effect of citrate/cis-aconitate on oxidative metabolism during transformation of Trypanosoma brucei.

Authors:  P Overath; J Czichos; C Haas
Journal:  Eur J Biochem       Date:  1986-10-01

9.  Requirement of a polypyrimidine tract for trans-splicing in trypanosomes: discriminating the PARP promoter from the immediately adjacent 3' splice acceptor site.

Authors:  J Huang; L H Van der Ploeg
Journal:  EMBO J       Date:  1991-12       Impact factor: 11.598

Review 10.  Trans splicing in trypanosomes--archaism or adaptation?

Authors:  P W Laird
Journal:  Trends Genet       Date:  1989-07       Impact factor: 11.639

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  4 in total

1.  Genome-wide analysis of mRNA abundance in two life-cycle stages of Trypanosoma brucei and identification of splicing and polyadenylation sites.

Authors:  Tim Nicolai Siegel; Doeke R Hekstra; Xuning Wang; Scott Dewell; George A M Cross
Journal:  Nucleic Acids Res       Date:  2010-04-12       Impact factor: 16.971

2.  Spliced leader trapping reveals widespread alternative splicing patterns in the highly dynamic transcriptome of Trypanosoma brucei.

Authors:  Daniel Nilsson; Kapila Gunasekera; Jan Mani; Magne Osteras; Laurent Farinelli; Loic Baerlocher; Isabel Roditi; Torsten Ochsenreiter
Journal:  PLoS Pathog       Date:  2010-08-05       Impact factor: 6.823

3.  Differential expression of a protease gene family in African trypanosomes.

Authors:  Jared R Helm; Mary E Wilson; John E Donelson
Journal:  Mol Biochem Parasitol       Date:  2008-09-19       Impact factor: 1.759

4.  Comparative ribosome profiling reveals extensive translational complexity in different Trypanosoma brucei life cycle stages.

Authors:  Juan-José Vasquez; Chung-Chau Hon; Jens T Vanselow; Andreas Schlosser; T Nicolai Siegel
Journal:  Nucleic Acids Res       Date:  2014-01-17       Impact factor: 16.971

  4 in total

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