Literature DB >> 1838258

Thermodynamics of cation-induced DNA condensation.

R Marquet1, C Houssier.   

Abstract

An estimation of the various free energy contributions to DNA collapse into toroidal particles is made, considering DNA bending and segment mobility, electrostatic repulsions between DNA chains, and attractive forces resulting from correlated counterion fluctuations. It is shown that the process of DNA condensation becomes spontaneous in the presence of divalent cations in methanol, and in the presence of tri- or tetravalent cations in water media. This is a consequence of the large decrease in the electrostatic repulsion between charged DNA segments, allowing the attractive force resulting from correlated fluctuations of bound counterions to become dominant. Our calculations indicate that short DNA fragments would condense into multimolecular particles in order to maximize the attractive force due to counterion fluctuations.

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Year:  1991        PMID: 1838258     DOI: 10.1080/07391102.1991.10507900

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  17 in total

1.  Unique condensation patterns of triplex DNA: physical aspects and physiological implications.

Authors:  Rivka Goobes; Orit Cohen; Abraham Minsky
Journal:  Nucleic Acids Res       Date:  2002-05-15       Impact factor: 16.971

2.  Direct observation of counterion organization in F-actin polyelectrolyte bundles.

Authors:  T E Angelini; H Liang; W Wriggers; G C L Wong
Journal:  Eur Phys J E Soft Matter       Date:  2005-04       Impact factor: 1.890

3.  Fluorescence dynamics of DNA condensed by the molecular crowding agent poly(ethylene glycol).

Authors:  Mamata H Kombrabail; G Krishnamoorthy
Journal:  J Fluoresc       Date:  2005-09       Impact factor: 2.217

4.  Surface-directed DNA condensation in the absence of soluble multivalent cations.

Authors:  Y Fang; J H Hoh
Journal:  Nucleic Acids Res       Date:  1998-01-15       Impact factor: 16.971

5.  23Na NMR study of the effect of organic osmolytes on DNA counterion atmosphere.

Authors:  S Flock; R Labarbe; C Houssier
Journal:  Biophys J       Date:  1996-09       Impact factor: 4.033

6.  DNA mesophases induced by spermidine: structural properties and biological implications.

Authors:  J Pelta; D Durand; J Doucet; F Livolant
Journal:  Biophys J       Date:  1996-07       Impact factor: 4.033

7.  Helical structure determines different susceptibilities of dsDNA, dsRNA, and tsDNA to counterion-induced condensation.

Authors:  Alexei A Kornyshev; Sergey Leikin
Journal:  Biophys J       Date:  2013-05-07       Impact factor: 4.033

8.  Stretching of single collapsed DNA molecules.

Authors:  C G Baumann; V A Bloomfield; S B Smith; C Bustamante; M D Wang; S M Block
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

9.  Contribution of hydrophobicity to thermodynamics of ligand-DNA binding and DNA collapse.

Authors:  Mayank M Patel; Thomas J Anchordoquy
Journal:  Biophys J       Date:  2005-01-14       Impact factor: 4.033

10.  ON-OFF switching of transcriptional activity of large DNA through a conformational transition in cooperation with phospholipid membrane.

Authors:  Akihiko Tsuji; Kenichi Yoshikawa
Journal:  J Am Chem Soc       Date:  2010-09-08       Impact factor: 15.419

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