Literature DB >> 18378448

Exploring predictive QSAR models for hepatocyte toxicity of phenols using QTMS descriptors.

Kunal Roy1, Paul L A Popelier.   

Abstract

We construct predictive QSAR models for hepatocyte toxicity data of phenols using Quantum Topological Molecular Similarity (QTMS) descriptors along with hydrophobicity (logP) as predictor variables. The QTMS descriptors were calculated at different levels of theory including AM1, HF/3-21G(d), HF/6-31G(d), B3LYP/6-31+G(d,p), B3LYP/6-311+G(2d,p) and MP2/6-311+G(2d,p). The external predictability of the best models at the higher levels of theory is higher than that at the lower levels. Moreover, the best QTMS models are better in external predictability than the PLS models using pK(a) and Hammett sigma(+) along with logP. The current study implies the advantage of quantum chemically derived descriptors over physicochemical (experimentally derived or tabular) electronic descriptors in QSAR studies.

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Year:  2008        PMID: 18378448     DOI: 10.1016/j.bmcl.2008.03.035

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  4 in total

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4.  Modeling biophysical and biological properties from the characteristics of the molecular electron density, electron localization and delocalization matrices, and the electrostatic potential.

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Journal:  J Comput Chem       Date:  2014-04-29       Impact factor: 3.376

  4 in total

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