Literature DB >> 18378441

Metabolic flux analysis as a tool in metabolic engineering of plants.

Jörg Schwender1.   

Abstract

Methods of metabolic flux analysis (MFA) provide insights into the theoretical capabilities of metabolic networks and allow probing the in vivo performance of cellular metabolism. In recent years, an increasing awareness has developed that network analysis methods within the systems biology toolbox are serving to improve our understanding and ability to manipulate metabolism. In this minireview the potential of MFA to increase the chances of success in metabolic engineering of plants is presented, recent progress related to engineering and flux analysis in central metabolism of plants is discussed, and some recent advances in flux analysis methodology are highlighted.

Mesh:

Year:  2008        PMID: 18378441     DOI: 10.1016/j.copbio.2008.02.006

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  35 in total

1.  13C-tracer and gas chromatography-mass spectrometry analyses reveal metabolic flux distribution in the oleaginous microalga Chlorella protothecoides.

Authors:  Wei Xiong; Lixia Liu; Chao Wu; Chen Yang; Qingyu Wu
Journal:  Plant Physiol       Date:  2010-08-18       Impact factor: 8.340

2.  Cellular Plasticity in Response to Suppression of Storage Proteins in the Brassica napus Embryo.

Authors:  Hardy Rolletschek; Jörg Schwender; Christina König; Kent D Chapman; Trevor Romsdahl; Christin Lorenz; Hans-Peter Braun; Peter Denolf; Katrien Van Audenhove; Eberhard Munz; Nicolas Heinzel; Stefan Ortleb; Twan Rutten; Sean McCorkle; Taras Borysyuk; André Guendel; Hai Shi; Michiel Vander Auwermeulen; Stephane Bourot; Ljudmilla Borisjuk
Journal:  Plant Cell       Date:  2020-04-30       Impact factor: 11.277

3.  (13)C-based metabolic flux analysis.

Authors:  Nicola Zamboni; Sarah-Maria Fendt; Martin Rühl; Uwe Sauer
Journal:  Nat Protoc       Date:  2009-05-21       Impact factor: 13.491

4.  Capturing metabolite channeling in metabolic flux phenotypes.

Authors:  Thomas C R Williams; Lee J Sweetlove; R George Ratcliffe
Journal:  Plant Physiol       Date:  2011-09-06       Impact factor: 8.340

Review 5.  Plant metabolic modeling: achieving new insight into metabolism and metabolic engineering.

Authors:  Kambiz Baghalian; Mohammad-Reza Hajirezaei; Falk Schreiber
Journal:  Plant Cell       Date:  2014-10-24       Impact factor: 11.277

Review 6.  Systems analysis of plant functional, transcriptional, physical interaction, and metabolic networks.

Authors:  George W Bassel; Allison Gaudinier; Siobhan M Brady; Lars Hennig; Seung Y Rhee; Ive De Smet
Journal:  Plant Cell       Date:  2012-10-30       Impact factor: 11.277

7.  Metabolic network fluxes in heterotrophic Arabidopsis cells: stability of the flux distribution under different oxygenation conditions.

Authors:  Thomas C R Williams; Laurent Miguet; Shyam K Masakapalli; Nicholas J Kruger; Lee J Sweetlove; R George Ratcliffe
Journal:  Plant Physiol       Date:  2008-07-30       Impact factor: 8.340

8.  Metabolic turnover analysis by a combination of in vivo 13C-labelling from 13CO2 and metabolic profiling with CE-MS/MS reveals rate-limiting steps of the C3 photosynthetic pathway in Nicotiana tabacum leaves.

Authors:  Tomohisa Hasunuma; Kazuo Harada; Shin-Ichi Miyazawa; Akihiko Kondo; Eiichiro Fukusaki; Chikahiro Miyake
Journal:  J Exp Bot       Date:  2009-12-21       Impact factor: 6.992

9.  Subcellular flux analysis of central metabolism in a heterotrophic Arabidopsis cell suspension using steady-state stable isotope labeling.

Authors:  Shyam K Masakapalli; Pascaline Le Lay; Joanna E Huddleston; Naomi L Pollock; Nicholas J Kruger; R George Ratcliffe
Journal:  Plant Physiol       Date:  2009-11-25       Impact factor: 8.340

10.  Carbon and nitrogen provisions alter the metabolic flux in developing soybean embryos.

Authors:  Doug K Allen; Jamey D Young
Journal:  Plant Physiol       Date:  2013-01-11       Impact factor: 8.340

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