Literature DB >> 18377934

Conserved folding pathways of alpha-lactalbumin and lysozyme revealed by kinetic CD, fluorescence, NMR, and interrupted refolding experiments.

Kai Schlepckow1, Julia Wirmer, Annett Bachmann, Thomas Kiefhaber, Harald Schwalbe.   

Abstract

In this report, it is shown by a combination of stopped-flow CD, fluorescence, and time-resolved NMR studies that the Ca(2+)-induced refolding of bovine alpha-lactalbumin (BLA) at constant denaturant concentration (4 M urea) exhibits triple-exponential kinetics. In order to distinguish between parallel folding pathways and a strictly sequential formation of the native state, interrupted refolding experiments were conducted. We show here that the Ca(2+)-induced refolding of BLA involves parallel pathways and the transient formation of a folding intermediate on the millisecond timescale. Our data furthermore suggest that the two structurally homologous proteins BLA and hen egg white lysozyme share a common folding mechanism. We provide evidence that the guiding role of long-range interactions in the unfolded state of lysozyme in mediating intersubdomain interactions during folding is replaced in the case of BLA by the Ca(2+)-binding site. Time-resolved NMR spectroscopy, in combination with fast ion release from caged compounds, enables the measurement of complex protein folding kinetics at protein concentrations as low as 100 microM and the concomitant detection of conformational transitions with rate constants of up to 8 s(-1).

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Year:  2008        PMID: 18377934     DOI: 10.1016/j.jmb.2008.02.033

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  12 in total

1.  Importance of time-ordered non-uniform sampling of multi-dimensional NMR spectra of Aβ1-42 peptide under aggregating conditions.

Authors:  Jinfa Ying; C Ashley Barnes; John M Louis; Ad Bax
Journal:  J Biomol NMR       Date:  2019-08-12       Impact factor: 2.835

Review 2.  α-Lactalbumin, Amazing Calcium-Binding Protein.

Authors:  Eugene A Permyakov
Journal:  Biomolecules       Date:  2020-08-20

3.  Monitoring 15N Chemical Shifts During Protein Folding by Pressure-Jump NMR.

Authors:  Cyril Charlier; Joseph M Courtney; T Reid Alderson; Philip Anfinrud; Ad Bax
Journal:  J Am Chem Soc       Date:  2018-06-25       Impact factor: 15.419

Review 4.  Protein NMR: Boundless opportunities.

Authors:  Ad Bax; G Marius Clore
Journal:  J Magn Reson       Date:  2019-07-09       Impact factor: 2.229

5.  Fast mapping of global protein folding states by multivariate NMR: a GPS for proteins.

Authors:  Anders Malmendal; Jarl Underhaug; Daniel E Otzen; Niels C Nielsen
Journal:  PLoS One       Date:  2010-04-21       Impact factor: 3.240

6.  Fast and slow tracks in lysozyme folding elucidated by the technique of disulfide scrambling.

Authors:  Jui-Yoa Chang; Bao-Yuan Lu; Li Li
Journal:  Protein J       Date:  2009-08       Impact factor: 2.371

7.  Interrupted Pressure-Jump NMR Experiments Reveal Resonances of On-Pathway Protein Folding Intermediate.

Authors:  Cyril Charlier; Joseph M Courtney; Philip Anfinrud; Ad Bax
Journal:  J Phys Chem B       Date:  2018-10-10       Impact factor: 2.991

8.  Kinetic study of beta-amyloid residue accessibility using reductive alkylation and mass spectrometry.

Authors:  Irina Ramos; Dan Fabris; Wei Qi; Erik J Fernandez; Theresa A Good
Journal:  Biotechnol Bioeng       Date:  2009-09-01       Impact factor: 4.530

Review 9.  What lessons can be learned from studying the folding of homologous proteins?

Authors:  Adrian A Nickson; Jane Clarke
Journal:  Methods       Date:  2010-06-04       Impact factor: 3.608

10.  Unfolding bovine α-lactalbumin with T-jump: Characterizing disordered intermediates via time-resolved x-ray solution scattering and molecular dynamics simulations.

Authors:  Darren J Hsu; Denis Leshchev; Irina Kosheleva; Kevin L Kohlstedt; Lin X Chen
Journal:  J Chem Phys       Date:  2021-03-14       Impact factor: 3.488

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