Literature DB >> 18373226

A simple silica-based method for metagenomic DNA extraction from soil and sediments.

R Rojas-Herrera1, J Narváez-Zapata, M Zamudio-Maya, M E Mena-Martínez.   

Abstract

A new method is described for extraction of metagenomic DNA from soil and sediments which is based on DNA adsorption to silica without the use of phenol, ethanol precipitation or a cesium chloride gradient. High-quality DNA was obtained, and PCR inhibition was overcome by adding bovine serum albumin and adjusting magnesium concentration. By using PCR-DGGE with Firmicutes and lactic acid bacteria-specific primers the extracted metagenomic DNA was shown to contain a mixture of bacterial genomes. This method can be used for screening bacterial diversity in soil and sediment samples.

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Year:  2008        PMID: 18373226     DOI: 10.1007/s12033-008-9061-8

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  17 in total

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  7 in total

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