Literature DB >> 18369876

Glycoprotein enrichment through lectin affinity techniques.

Yehia Mechref1, Milan Madera, Milos V Novotny.   

Abstract

Posttranslational modifications (PTM) of proteins are among the key biological regulators of function, activity, localization, and interaction. The fact that no more than 30,000-50,000 proteins are encoded by the human genome underlines the importance of posttranslational modifications in modulating the activities and functions of proteins in health and disease. With approximately 50% of all proteins now considered to be glycosylated, its physiological importance in mammalian systems is imperative. Aberrant glycosylation has now been recognized as an attribute of many mammalian diseases, including hereditary disorders, immune deficiencies, neurodegenerative diseases, cardiovascular conditions, and cancer. As many potential disease biomarkers may be glycoproteins present in only minute quantities in tissue extracts and physiological fluids, glycoprotein isolation and enrichment may be critical in a search for such biomarkers. For decades, efforts have been focused on the development of glycoprotein enrichment from complex biological samples. Logically, the great majority of these enrichment methodologies rely on the use of immobilized lectins, which permit selective enrichment of the pools of glycoproteins for proteomic/glycomic studies. In this chapter, lectin affinity chromatography in different formats are described, including tubes; packed columns, and microfluidic channels.

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Year:  2008        PMID: 18369876     DOI: 10.1007/978-1-60327-064-9_29

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  23 in total

Review 1.  Biomarkers for cognitive impairment in Parkinson disease.

Authors:  Min Shi; Bertrand R Huber; Jing Zhang
Journal:  Brain Pathol       Date:  2010-05       Impact factor: 6.508

2.  Simultaneous characterization of glyco- and phosphoproteomes of mouse brain membrane proteome with electrostatic repulsion hydrophilic interaction chromatography.

Authors:  Huoming Zhang; Tiannan Guo; Xin Li; Arnab Datta; Jung Eun Park; Jie Yang; Sai Kiang Lim; James P Tam; Siu Kwan Sze
Journal:  Mol Cell Proteomics       Date:  2010-01-04       Impact factor: 5.911

3.  Glycoprotein Enrichment Analytical Techniques: Advantages and Disadvantages.

Authors:  R Zhu; L Zacharias; K M Wooding; W Peng; Y Mechref
Journal:  Methods Enzymol       Date:  2017-01-16       Impact factor: 1.600

4.  Glycoproteins Enrichment and LC-MS/MS Glycoproteomics in Central Nervous System Applications.

Authors:  Rui Zhu; Ehwang Song; Ahmed Hussein; Firas H Kobeissy; Yehia Mechref
Journal:  Methods Mol Biol       Date:  2017

Review 5.  Protein analysis by shotgun/bottom-up proteomics.

Authors:  Yaoyang Zhang; Bryan R Fonslow; Bing Shan; Moon-Chang Baek; John R Yates
Journal:  Chem Rev       Date:  2013-02-26       Impact factor: 60.622

6.  LC-MS/MS analysis of permethylated N-glycans facilitating isomeric characterization.

Authors:  Shiyue Zhou; Xue Dong; Lucas Veillon; Yifan Huang; Yehia Mechref
Journal:  Anal Bioanal Chem       Date:  2016-10-28       Impact factor: 4.142

7.  Parallel data acquisition of in-source fragmented glycopeptides to sequence the glycosylation sites of proteins.

Authors:  Jingfu Zhao; Ehwang Song; Rui Zhu; Yehia Mechref
Journal:  Electrophoresis       Date:  2016-04-09       Impact factor: 3.535

Review 8.  Recent advances in mass spectrometric analysis of glycoproteins.

Authors:  Alireza Banazadeh; Lucas Veillon; Kerry M Wooding; Masoud Zabet-Moghaddam; Yehia Mechref
Journal:  Electrophoresis       Date:  2016-12-15       Impact factor: 3.535

9.  Identification of candidate biomarkers with cancer-specific glycosylation in the tissue and serum of endometrioid ovarian cancer patients by glycoproteomic analysis.

Authors:  Karen L Abbott; Jae-Min Lim; Lance Wells; Benedict B Benigno; John F McDonald; Michael Pierce
Journal:  Proteomics       Date:  2010-02       Impact factor: 3.984

10.  Towards an integrated proteomic and glycomic approach to finding cancer biomarkers.

Authors:  Allen D Taylor; William S Hancock; Marina Hincapie; Naoyuki Taniguchi; Samir M Hanash
Journal:  Genome Med       Date:  2009-06-04       Impact factor: 11.117

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