Literature DB >> 23438204

Protein analysis by shotgun/bottom-up proteomics.

Yaoyang Zhang1, Bryan R Fonslow, Bing Shan, Moon-Chang Baek, John R Yates.   

Abstract

Mesh：

Substances：

Year:  2013        PMID： 23438204      PMCID： PMC3751594          DOI： 10.1021/cr3003533

Source DB:  PubMed          Journal:  Chem Rev        ISSN： 0009-2665            Impact factor:   60.622


× No keyword cloud information.
  815 in total

Review 1.  Comparative proteomics based on stable isotope labeling and affinity selection.

Authors:  Fred E Regnier; Larry Riggs; Roujian Zhang; Li Xiong; Peiran Liu; Asish Chakraborty; Erin Seeley; Cathy Sioma; Robert A Thompson
Journal:  J Mass Spectrom       Date:  2002-02       Impact factor: 1.982

2.  Options and considerations when selecting a quantitative proteomics strategy.

Authors:  Bruno Domon; Ruedi Aebersold
Journal:  Nat Biotechnol       Date:  2010-07-09       Impact factor: 54.908

3.  Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors.

Authors:  Danielle L Swaney; Graeme C McAlister; Matthew Wirtala; Jae C Schwartz; John E P Syka; Joshua J Coon
Journal:  Anal Chem       Date:  2007-01-15       Impact factor: 6.986

4.  Lookup peaks: a hybrid of de novo sequencing and database search for protein identification by tandem mass spectrometry.

Authors:  Marshall Bern; Yuhan Cai; David Goldberg
Journal:  Anal Chem       Date:  2007-01-23       Impact factor: 6.986

5.  Implementation of electron-transfer dissociation on a hybrid linear ion trap-orbitrap mass spectrometer.

Authors:  Graeme C McAlister; Doug Phanstiel; David M Good; W Travis Berggren; Joshua J Coon
Journal:  Anal Chem       Date:  2007-04-19       Impact factor: 6.986

6.  Antibody-free, targeted mass-spectrometric approach for quantification of proteins at low picogram per milliliter levels in human plasma/serum.

Authors:  Tujin Shi; Thomas L Fillmore; Xuefei Sun; Rui Zhao; Athena A Schepmoes; Mahmud Hossain; Fang Xie; Si Wu; Jong-Seo Kim; Nathan Jones; Ronald J Moore; Ljiljana Pasa-Tolić; Jacob Kagan; Karin D Rodland; Tao Liu; Keqi Tang; David G Camp; Richard D Smith; Wei-Jun Qian
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-04       Impact factor: 11.205

7.  Proteome analysis of serum from type 2 diabetics with nephropathy.

Authors:  Hyun-Jung Kim; Eun-Hee Cho; Ji-Hye Yoo; Pan-Kyeom Kim; Jun-Seop Shin; Mi-Ryung Kim; Chan-Wha Kim
Journal:  J Proteome Res       Date:  2007-02       Impact factor: 4.466

8.  Intact-protein-based high-resolution three-dimensional quantitative analysis system for proteome profiling of biological fluids.

Authors:  Hong Wang; Shawn G Clouthier; Vladimir Galchev; David E Misek; Ulrich Duffner; Chang-Ki Min; Rong Zhao; John Tra; Gilbert S Omenn; James L M Ferrara; Samir M Hanash
Journal:  Mol Cell Proteomics       Date:  2005-02-09       Impact factor: 5.911

9.  Global analysis of lysine ubiquitination by ubiquitin remnant immunoaffinity profiling.

Authors:  Guoqiang Xu; Jeremy S Paige; Samie R Jaffrey
Journal:  Nat Biotechnol       Date:  2010-07-18       Impact factor: 54.908

10.  PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory.

Authors:  Yu Xue; Ao Li; Lirong Wang; Huanqing Feng; Xuebiao Yao
Journal:  BMC Bioinformatics       Date:  2006-03-20       Impact factor: 3.169
View more
  355 in total

1.  A comprehensive pipeline for translational top-down proteomics from a single blood draw.

Authors:  Timothy K Toby; Luca Fornelli; Kristina Srzentić; Caroline J DeHart; Josh Levitsky; John Friedewald; Neil L Kelleher
Journal:  Nat Protoc       Date:  2019-01       Impact factor: 13.491

2.  Can Protein Expression Be Regulated by Modulation of tRNA Modification Profiles?

Authors:  Leticia Pollo-Oliveira; Valérie de Crécy-Lagard
Journal:  Biochemistry       Date:  2018-12-18       Impact factor: 3.162

3.  Sequencing a Bispecific Antibody by Controlling Chain Concentration Effects When Using an Immobilized Nonspecific Protease.

Authors:  Robert A D'Ippolito; Maria C Panepinto; Keira E Mahoney; Dina L Bai; Jeffrey Shabanowitz; Donald F Hunt
Journal:  Anal Chem       Date:  2020-07-13       Impact factor: 6.986

4.  Peptide-level Robust Ridge Regression Improves Estimation, Sensitivity, and Specificity in Data-dependent Quantitative Label-free Shotgun Proteomics.

Authors:  Ludger J E Goeminne; Kris Gevaert; Lieven Clement
Journal:  Mol Cell Proteomics       Date:  2015-11-13       Impact factor: 5.911

5.  Selected Reaction Monitoring Mass Spectrometry for Absolute Protein Quantification.

Authors:  Nathan P Manes; Jessica M Mann; Aleksandra Nita-Lazar
Journal:  J Vis Exp       Date:  2015-08-17       Impact factor: 1.355

Review 6.  A Biologist's Field Guide to Multiplexed Quantitative Proteomics.

Authors:  Corey E Bakalarski; Donald S Kirkpatrick
Journal:  Mol Cell Proteomics       Date:  2016-02-12       Impact factor: 5.911

7.  Isobaric Multiplex Labeling Reagents for Carbonyl-Containing Compound (SUGAR) Tags: A Probe for Quantitative Glycomic Analysis.

Authors:  Yu Feng; Bingming Chen; Qinying Yu; Xuefei Zhong; Dustin C Frost; Chrysanthy Ikonomidou; Lingjun Li
Journal:  Anal Chem       Date:  2019-02-04       Impact factor: 6.986

Review 8.  Proteomic approaches to quantify cysteine reversible modifications in aging and neurodegenerative diseases.

Authors:  Liqing Gu; Renã A S Robinson
Journal:  Proteomics Clin Appl       Date:  2016-11-11       Impact factor: 3.494

9.  Angiogenic and Immunologic Proteins Identified by Deep Proteomic Profiling of Human Retinal and Choroidal Vascular Endothelial Cells: Potential Targets for New Biologic Drugs.

Authors:  Justine R Smith; Larry L David; Binoy Appukuttan; Phillip A Wilmarth
Journal:  Am J Ophthalmol       Date:  2018-03-17       Impact factor: 5.258

Review 10.  Blood-borne biomarkers and bioindicators for linking exposure to health effects in environmental health science.

Authors:  M Ariel Geer Wallace; Tzipporah M Kormos; Joachim D Pleil
Journal:  J Toxicol Environ Health B Crit Rev       Date:  2016-10-19       Impact factor: 6.393
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.