Literature DB >> 18368053

Coordination of gene expression between organellar and nuclear genomes.

Jesse D Woodson1, Joanne Chory.   

Abstract

Following the acquisition of chloroplasts and mitochondria by eukaryotic cells during endosymbiotic evolution, most of the genes in these organelles were either lost or transferred to the nucleus. Encoding organelle-destined proteins in the nucleus allows for host control of the organelle. In return, organelles send signals to the nucleus to coordinate nuclear and organellar activities. In photosynthetic eukaryotes, additional interactions exist between mitochondria and chloroplasts. Here we review recent advances in elucidating the intracellular signalling pathways that coordinate gene expression between organelles and the nucleus, with a focus on photosynthetic plants.

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Year:  2008        PMID: 18368053      PMCID: PMC4854206          DOI: 10.1038/nrg2348

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  131 in total

1.  Characterization of a DNA-binding protein implicated in transcription in wheat mitochondria.

Authors:  T M Ikeda; M W Gray
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

2.  Direct transcriptional control of the chloroplast genes psbA and psaAB adjusts photosynthesis to light energy distribution in plants.

Authors:  T Pfannschmidt; A Nilsson; A Tullberg; G Link; J F Allen
Journal:  IUBMB Life       Date:  1999-09       Impact factor: 3.885

3.  Chlamydomonas nuclear mutants that fail to assemble respiratory or photosynthetic electron transfer complexes.

Authors:  F J Lown; A T Watson; S Purton
Journal:  Biochem Soc Trans       Date:  2001-08       Impact factor: 5.407

4.  A pentatricopeptide repeat-containing gene that promotes the processing of aberrant atp6 RNA of cytoplasmic male-sterile rice.

Authors:  Tomohiko Kazama; Kinya Toriyama
Journal:  FEBS Lett       Date:  2003-06-05       Impact factor: 4.124

Review 5.  Mitochondrial retrograde signaling.

Authors:  Zhengchang Liu; Ronald A Butow
Journal:  Annu Rev Genet       Date:  2006       Impact factor: 16.830

6.  The role of photorespiration in redox and energy balance of photosynthetic plant cells: A study with a barley mutant deficient in glycine decarboxylase.

Authors:  Abir U. Igamberdiev; Natalia V. Bykova; Peter J. Lea; Per Gardeström
Journal:  Physiol Plant       Date:  2001-04       Impact factor: 4.500

7.  Analysis of the genome sequence of the flowering plant Arabidopsis thaliana.

Authors: 
Journal:  Nature       Date:  2000-12-14       Impact factor: 49.962

8.  Biochemical and molecular characterization of photosystem I deficiency in the NCS6 mitochondrial mutant of maize.

Authors:  Shunxing Jiao; Jeffry M Thornsberry; Thomas E Elthon; Kathleen J Newton
Journal:  Plant Mol Biol       Date:  2005-01       Impact factor: 4.076

9.  Complex I impairment, respiratory compensations, and photosynthetic decrease in nuclear and mitochondrial male sterile mutants of Nicotiana sylvestris.

Authors:  M Sabar; R De Paepe; Y de Kouchkovsky
Journal:  Plant Physiol       Date:  2000-11       Impact factor: 8.340

10.  Chloroplast to nucleus communication triggered by accumulation of Mg-protoporphyrinIX.

Authors:  Asa Strand; Tadao Asami; Jose Alonso; Joseph R Ecker; Joanne Chory
Journal:  Nature       Date:  2003-01-02       Impact factor: 49.962

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  253 in total

1.  Chloroplast biogenesis: control of plastid development, protein import, division and inheritance.

Authors:  Wataru Sakamoto; Shin-Ya Miyagishima; Paul Jarvis
Journal:  Arabidopsis Book       Date:  2008-07-22

2.  Mitochondrial biogenesis and function in Arabidopsis.

Authors:  A Harvey Millar; Ian D Small; David A Day; James Whelan
Journal:  Arabidopsis Book       Date:  2008-07-09

3.  Rewiring of posttranscriptional RNA regulons: Puf4p in fungi as an example.

Authors:  Huifeng Jiang; Xiaoxian Guo; Lin Xu; Zhenglong Gu
Journal:  Mol Biol Evol       Date:  2012-03-21       Impact factor: 16.240

4.  Mitochondrial genomes gleaned from human whole-exome sequencing.

Authors:  Ernesto Picardi; Graziano Pesole
Journal:  Nat Methods       Date:  2012-05-30       Impact factor: 28.547

Review 5.  Function of chloroplast RNA-binding proteins.

Authors:  Jessica Jacobs; Ulrich Kück
Journal:  Cell Mol Life Sci       Date:  2010-09-17       Impact factor: 9.261

6.  Can the import of mRNA into chloroplasts be mediated by a secondary structure of a small non-coding RNA?

Authors:  Gustavo Gómez; Vicente Pallás
Journal:  Plant Signal Behav       Date:  2010-11-01

7.  The developmental dynamics of the maize leaf transcriptome.

Authors:  Pinghua Li; Lalit Ponnala; Neeru Gandotra; Lin Wang; Yaqing Si; S Lori Tausta; Tesfamichael H Kebrom; Nicholas Provart; Rohan Patel; Christopher R Myers; Edwin J Reidel; Robert Turgeon; Peng Liu; Qi Sun; Timothy Nelson; Thomas P Brutnell
Journal:  Nat Genet       Date:  2010-10-31       Impact factor: 38.330

8.  VDAC contributes to mRNA levels in Saccharomyces cerevisiae cells by the intracellular reduction/oxidation state dependent and independent mechanisms.

Authors:  Hanna Gałgańska; Monika Antoniewicz; Małgorzata Budzińska; Lukasz Gałgański; Hanna Kmita
Journal:  J Bioenerg Biomembr       Date:  2010-11-12       Impact factor: 2.945

9.  Chloroplasts extend stromules independently and in response to internal redox signals.

Authors:  Jacob O Brunkard; Anne M Runkel; Patricia C Zambryski
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-06       Impact factor: 11.205

10.  A membrane-bound NAC transcription factor, ANAC017, mediates mitochondrial retrograde signaling in Arabidopsis.

Authors:  Sophia Ng; Aneta Ivanova; Owen Duncan; Simon R Law; Olivier Van Aken; Inge De Clercq; Yan Wang; Chris Carrie; Lin Xu; Beata Kmiec; Hayden Walker; Frank Van Breusegem; James Whelan; Estelle Giraud
Journal:  Plant Cell       Date:  2013-09-17       Impact factor: 11.277

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