Literature DB >> 18363620

Dynamics change of phoborhodopsin and transducer by activation: study using D75N mutant of the receptor by site-directed solid-state 13C NMR.

Izuru Kawamura1, Hideaki Yoshida, Yoichi Ikeda, Satoru Yamaguchi, Satoru Tuzi, Hazime Saitô, Naoki Kamo, Akira Naito.   

Abstract

Pharaonis phoborhodopsin (ppR or sensory rhodopsin II) is a negative phototaxis receptor of Natronomonas pharaonis, and forms a complex, which transmits the photosignal into cytoplasm, with its cognate transducer (pHtrII). We examined a possible local dynamics change of ppR and its D75N mutant complexed with pHtrII, using solid-state (13)C NMR of [3-(13)C]Ala- and [1-(13)C]Val-labeled preparations. We distinguished Ala C(beta) (13)C signals of relatively static stem (Ala221) in the C-terminus of the receptors from those of flexible tip (Ala228, 234, 236 and 238), utilizing a mutant with truncated C-terminus. The local fluctuation frequency at the C-terminal tip was appreciably decreased when ppR was bound to pHtrII, while it was increased when D75N, that mimics the signaling state because of disrupted salt bridge between C and G helices prerequisite for the signal transfer, was bound to pHtrII. This signal change may be considered with the larger dissociation constant of the complex between pHtrII and M-state of ppR. At the same time, it turned out that fluctuation frequency of cytoplasmic portion of pHtrII is lowered when ppR is replaced by D75N in the complex with pHtrII. This means that the C-terminal tip partly participates in binding with the linker region of pHtrII in the dark, but this portion might be released at the signaling state leading to mutual association of the two transducers in the cytoplasmic regions within the ppR/pHtrII complex.

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Year:  2008        PMID: 18363620     DOI: 10.1111/j.1751-1097.2008.00326.x

Source DB:  PubMed          Journal:  Photochem Photobiol        ISSN: 0031-8655            Impact factor:   3.421


  4 in total

1.  An active photoreceptor intermediate revealed by in situ photoirradiated solid-state NMR spectroscopy.

Authors:  Yuya Tomonaga; Tetsurou Hidaka; Izuru Kawamura; Takudo Nishio; Kazuhiro Ohsawa; Takashi Okitsu; Akimori Wada; Yuki Sudo; Naoki Kamo; Ayyalusamy Ramamoorthy; Akira Naito
Journal:  Biophys J       Date:  2011-11-15       Impact factor: 4.033

Review 2.  Chemical shift tensor - the heart of NMR: Insights into biological aspects of proteins.

Authors:  Hazime Saitô; Isao Ando; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05-07       Impact factor: 9.795

3.  Retinal Configuration of ppR Intermediates Revealed by Photoirradiation Solid-State NMR and DFT.

Authors:  Yoshiteru Makino; Izuru Kawamura; Takashi Okitsu; Akimori Wada; Naoki Kamo; Yuki Sudo; Kazuyoshi Ueda; Akira Naito
Journal:  Biophys J       Date:  2018-07-03       Impact factor: 4.033

Review 4.  Solid state NMR and protein-protein interactions in membranes.

Authors:  Yimin Miao; Timothy A Cross
Journal:  Curr Opin Struct Biol       Date:  2013-09-11       Impact factor: 6.809

  4 in total

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