Literature DB >> 18344332

Archaea dominate the ammonia-oxidizing community in the rhizosphere of the freshwater macrophyte Littorella uniflora.

Martina Herrmann1, Aaron M Saunders, Andreas Schramm.   

Abstract

Archaeal and bacterial ammonia monooxygenase genes (amoA) had similar low relative abundances in freshwater sediment. In the rhizosphere of the submersed macrophyte Littorella uniflora, archaeal amoA was 500- to >8,000-fold enriched compared to bacterial amoA, suggesting that the enhanced nitrification activity observed in the rhizosphere was due to ammonia-oxidizing Archaea.

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Year:  2008        PMID： 18344332      PMCID： PMC2394948          DOI： 10.1128/AEM.02802-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  35 in total

1.  Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling.

Authors:  Alexander H Treusch; Sven Leininger; Arnulf Kletzin; Stephan C Schuster; Hans-Peter Klenk; Christa Schleper
Journal:  Environ Microbiol       Date:  2005-12       Impact factor: 5.491

2.  Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean.

Authors:  Gerhard J Herndl; Thomas Reinthaler; Eva Teira; Hendrik van Aken; Cornelius Veth; Annelie Pernthaler; Jakob Pernthaler
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

3.  Archaea in coastal marine environments.

Authors:  E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

4.  Distribution and diversity of archaeal ammonia monooxygenase genes associated with corals.

Authors:  J Michael Beman; Kathryn J Roberts; Linda Wegley; Forest Rohwer; Christopher A Francis
Journal:  Appl Environ Microbiol       Date:  2007-06-22       Impact factor: 4.792

5.  Effects of environmental conditions on the nitrifying population dynamics in a pilot wastewater treatment plant.

Authors:  Pär Lydmark; Robert Almstrand; Kristina Samuelsson; Ann Mattsson; Fred Sörensson; Per-Eric Lindgren; Malte Hermansson
Journal:  Environ Microbiol       Date:  2007-09       Impact factor: 5.491

6.  Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol.

Authors:  José R de la Torre; Christopher B Walker; Anitra E Ingalls; Martin Könneke; David A Stahl
Journal:  Environ Microbiol       Date:  2008-01-19       Impact factor: 5.491

7.  Temporal variation of denitrification activity in plant-covered, littoral sediment from lake hampen, denmark.

Authors:  P B Christensen; J Sørensen
Journal:  Appl Environ Microbiol       Date:  1986-06       Impact factor: 4.792

8.  Nanogram nitrite and nitrate determination in environmental and biological materials by vanadium (III) reduction with chemiluminescence detection.

Authors:  R S Braman; S A Hendrix
Journal:  Anal Chem       Date:  1989-12-15       Impact factor: 6.986

9.  Dynamics of nitrification and denitrification in root-oxygenated sediments and adaptation of ammonia-oxidizing bacteria to low-oxygen or anoxic habitats.

Authors:  P Bodelier; J A Libochant; C Blom; H J Laanbroek
Journal:  Appl Environ Microbiol       Date:  1996-11       Impact factor: 4.792

10.  Nitrosomonas Nm143-like ammonia oxidizers and Nitrospira marina-like nitrite oxidizers dominate the nitrifier community in a marine aquaculture biofilm.

Authors:  Bärbel U Foesel; Armin Gieseke; Carsten Schwermer; Peter Stief; Liat Koch; Eddie Cytryn; José R de la Torré; Jaap van Rijn; Dror Minz; Harold L Drake; Andreas Schramm
Journal:  FEMS Microbiol Ecol       Date:  2007-12-15       Impact factor: 4.194
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  46 in total

1.  Denaturing gradient gel electrophoresis and barcoded pyrosequencing reveal unprecedented archaeal diversity in mangrove sediment and rhizosphere samples.

Authors:  Ana C C Pires; Daniel F R Cleary; Adelaide Almeida; Angela Cunha; Simone Dealtry; Leda C S Mendonça-Hagler; Kornelia Smalla; Newton C M Gomes
Journal:  Appl Environ Microbiol       Date:  2012-06-01       Impact factor: 4.792

2.  Comparative analysis of 16S rRNA and amoA genes from archaea selected with organic and inorganic amendments in enrichment culture.

Authors:  Mouzhong Xu; Jon Schnorr; Brandon Keibler; Holly M Simon
Journal:  Appl Environ Microbiol       Date:  2012-01-20       Impact factor: 4.792

3.  Emergent macrophytes act selectively on ammonia-oxidizing bacteria and archaea.

Authors:  Rosalia Trias; Olaya Ruiz-Rueda; Arantzazu García-Lledó; Ariadna Vilar-Sanz; Rocío López-Flores; Xavier D Quintana; Sara Hallin; Lluís Bañeras
Journal:  Appl Environ Microbiol       Date:  2012-06-15       Impact factor: 4.792

4.  Molecular characterization and geological microenvironment of a microbial community inhabiting weathered receding shale cliffs.

Authors:  Charles S Cockell; David Pybus; Karen Olsson-Francis; Laura Kelly; David Petley; Nick Rosser; Kieren Howard; Fred Mosselmans
Journal:  Microb Ecol       Date:  2010-08-04       Impact factor: 4.552

5.  Enrichment and characterization of an autotrophic ammonia-oxidizing archaeon of mesophilic crenarchaeal group I.1a from an agricultural soil.

Authors:  Man-Young Jung; Soo-Je Park; Deullae Min; Jin-Seog Kim; W Irene C Rijpstra; Jaap S Sinninghe Damsté; Geun-Joong Kim; Eugene L Madsen; Sung-Keun Rhee
Journal:  Appl Environ Microbiol       Date:  2011-10-14       Impact factor: 4.792

6.  Quantitative assessment of ammonia-oxidizing bacterial communities in the epiphyton of submerged macrophytes in shallow lakes.

Authors:  M Coci; G W Nicol; G N Pilloni; M Schmid; M P Kamst-van Agterveld; P L E Bodelier; H J Laanbroek
Journal:  Appl Environ Microbiol       Date:  2010-01-22       Impact factor: 4.792

7.  Ammonium availability affects the ratio of ammonia-oxidizing bacteria to ammonia-oxidizing archaea in simulated creek ecosystems.

Authors:  Martina Herrmann; Andrea Scheibe; Sharon Avrahami; Kirsten Küsel
Journal:  Appl Environ Microbiol       Date:  2011-01-14       Impact factor: 4.792

8.  Effect of genetically modified poplars on soil microbial communities during the phytoremediation of waste mine tailings.

Authors:  Moonsuk Hur; Yongho Kim; Hae-Ryong Song; Jong Min Kim; Young Im Choi; Hana Yi
Journal:  Appl Environ Microbiol       Date:  2011-09-02       Impact factor: 4.792

9.  Autotrophic growth of bacterial and archaeal ammonia oxidizers in freshwater sediment microcosms incubated at different temperatures.

Authors:  Yucheng Wu; Xiubin Ke; Marcela Hernández; Baozhan Wang; Marc G Dumont; Zhongjun Jia; Ralf Conrad
Journal:  Appl Environ Microbiol       Date:  2013-03-01       Impact factor: 4.792

10.  Abundance and Diversity of Aerobic/Anaerobic Ammonia/Ammonium-Oxidizing Microorganisms in an Ammonium-Rich Aquitard in the Pearl River Delta of South China.

Authors:  Kwok-Ho Lee; Yong-Feng Wang; Ya Wang; Ji-Dong Gu; Jiu Jimmy Jiao
Journal:  Microb Ecol       Date:  2016-07-22       Impact factor: 4.552
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