Literature DB >> 18344327

Efficient production of L-ribose with a recombinant Escherichia coli biocatalyst.

Ryan D Woodyer1, Nathan J Wymer, F Michael Racine, Shama N Khan, Badal C Saha.   

Abstract

A new synthetic platform with potential for the production of several rare sugars, with l-ribose as the model target, is described. The gene encoding the unique NAD-dependent mannitol-1-dehydrogenase (MDH) from Apium graveolens (garden celery) was synthetically constructed for optimal expression in Escherichia coli. This MDH enzyme catalyzes the interconversion of several polyols and their l-sugar counterparts, including the conversion of ribitol to l-ribose. Expression of recombinant MDH in the active form was successfully achieved, and one-step purification was demonstrated. Using the created recombinant E. coli strain as a whole-cell catalyst, the synthetic utility was demonstrated for production of l-ribose, and the system was improved using shaken flask experiments. It was determined that addition of 50 to 500 microM ZnCl(2) and addition of 5 g/liter glycerol both improved production. The final levels of conversion achieved were >70% at a concentration of 40 g/liter and >50% at a concentration of 100 g/liter. The best conditions determined were then scaled up to a 1-liter fermentation that resulted in 55% conversion of 100 g/liter ribitol in 72 h, for a volumetric productivity of 17.4 g liter(-1) day(-1). This system represents a significantly improved method for the large-scale production of l-ribose.

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Year:  2008        PMID: 18344327      PMCID: PMC2394927          DOI: 10.1128/AEM.02768-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  30 in total

1.  ZINC, A COMPONENT OF YEAST ALCOHOL DEHYDROGENASE.

Authors:  B L Vallee; F L Hoch
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2.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
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Authors:  R T Voegele; G D Sweet; W Boos
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Authors:  B Fischer; I Sumner; P Goodenough
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Authors:  J M Stoop; D M Pharr
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10.  Substrate specificity and transport properties of the glycerol facilitator of Escherichia coli.

Authors:  K B Heller; E C Lin; T H Wilson
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