Literature DB >> 18343709

Brachypodium distachyon: making hay with a wild grass.

Magdalena Opanowicz1, Philippe Vain, John Draper, David Parker, John H Doonan.   

Abstract

Brachypodium distachyon is a wild grass with a short life cycle. Although it is related to small grain cereals such as wheat, its genome is only a fraction of the size. A draft genome sequence is currently available, and molecular and genetic tools have been developed for transformation, mutagenesis and gene mapping. Accessions collected from across its ancestral range show a surprising degree of phenotypic variation in many traits, including those implicated in domestication of the cereals. Thus, given its rapid cycling time and ease of cultivation, Brachypodium will be a useful model for investigating problems in grass biology.

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Year:  2008        PMID: 18343709     DOI: 10.1016/j.tplants.2008.01.007

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  70 in total

1.  Diversity and association of phenotypic and metabolomic traits in the close model grasses Brachypodium distachyon, B. stacei and B. hybridum.

Authors:  Diana López-Álvarez; Hassan Zubair; Manfred Beckmann; John Draper; Pilar Catalán
Journal:  Ann Bot       Date:  2017-03-01       Impact factor: 4.357

2.  Turnover of fatty acids during natural senescence of Arabidopsis, Brachypodium, and switchgrass and in Arabidopsis beta-oxidation mutants.

Authors:  Zhenle Yang; John B Ohlrogge
Journal:  Plant Physiol       Date:  2009-06-26       Impact factor: 8.340

3.  Brachypodium as a model for the grasses: today and the future.

Authors:  Jelena Brkljacic; Erich Grotewold; Randy Scholl; Todd Mockler; David F Garvin; Philippe Vain; Thomas Brutnell; Richard Sibout; Michael Bevan; Hikmet Budak; Ana L Caicedo; Caixia Gao; Yong Gu; Samuel P Hazen; Ben F Holt; Shin-Young Hong; Mark Jordan; Antonio J Manzaneda; Thomas Mitchell-Olds; Keiichi Mochida; Luis A J Mur; Chung-Mo Park; John Sedbrook; Michelle Watt; Shao Jian Zheng; John P Vogel
Journal:  Plant Physiol       Date:  2011-07-19       Impact factor: 8.340

4.  Comparative analysis of the cold acclimation and freezing tolerance capacities of seven diploid Brachypodium distachyon accessions.

Authors:  Katia Colton-Gagnon; Mohamed Ali Ali-Benali; Boris F Mayer; Rachel Dionne; Annick Bertrand; Sonia Do Carmo; Jean-Benoit Charron
Journal:  Ann Bot       Date:  2013-12-08       Impact factor: 4.357

5.  Regulation of FLOWERING LOCUS T by a microRNA in Brachypodium distachyon.

Authors:  Liang Wu; Dongfeng Liu; Jiajie Wu; Rongzhi Zhang; Zhengrui Qin; Danmei Liu; Aili Li; Daolin Fu; Wenxue Zhai; Long Mao
Journal:  Plant Cell       Date:  2013-11-27       Impact factor: 11.277

6.  Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat.

Authors:  Naxin Huo; John P Vogel; Gerard R Lazo; Frank M You; Yaqin Ma; Stephanie McMahon; Jan Dvorak; Olin D Anderson; Ming-Cheng Luo; Yong Q Gu
Journal:  Plant Mol Biol       Date:  2009-01-29       Impact factor: 4.076

7.  Brachypodium distachyon grain: identification and subcellular localization of storage proteins.

Authors:  C Larré; S Penninck; B Bouchet; V Lollier; O Tranquet; S Denery-Papini; F Guillon; H Rogniaux
Journal:  J Exp Bot       Date:  2010-06       Impact factor: 6.992

8.  Fine-scale comparative genetic and physical mapping supports map-based cloning strategies for the self-incompatibility loci of perennial ryegrass (Lolium perenne L.).

Authors:  Hiroshi Shinozuka; Noel O I Cogan; Kevin F Smith; German C Spangenberg; John W Forster
Journal:  Plant Mol Biol       Date:  2009-11-27       Impact factor: 4.076

9.  Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response.

Authors:  Jingyu Zhang; Yunyuan Xu; Qing Huan; Kang Chong
Journal:  BMC Genomics       Date:  2009-09-23       Impact factor: 3.969

10.  A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat.

Authors:  Yong Q Gu; Yaqin Ma; Naxin Huo; John P Vogel; Frank M You; Gerard R Lazo; William M Nelson; Carol Soderlund; Jan Dvorak; Olin D Anderson; Ming-Cheng Luo
Journal:  BMC Genomics       Date:  2009-10-27       Impact factor: 3.969

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