Literature DB >> 21771916

Brachypodium as a model for the grasses: today and the future.

Jelena Brkljacic1, Erich Grotewold, Randy Scholl, Todd Mockler, David F Garvin, Philippe Vain, Thomas Brutnell, Richard Sibout, Michael Bevan, Hikmet Budak, Ana L Caicedo, Caixia Gao, Yong Gu, Samuel P Hazen, Ben F Holt, Shin-Young Hong, Mark Jordan, Antonio J Manzaneda, Thomas Mitchell-Olds, Keiichi Mochida, Luis A J Mur, Chung-Mo Park, John Sedbrook, Michelle Watt, Shao Jian Zheng, John P Vogel.   

Abstract

Mesh：

Year:  2011        PMID： 21771916      PMCID： PMC3165879          DOI： 10.1104/pp.111.179531

Source DB:  PubMed          Journal:  Plant Physiol        ISSN： 0032-0889            Impact factor:   8.340


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  41 in total

1.  Natural variation of drought response in Brachypodium distachyon.

Authors:  Na Luo; Jianxiu Liu; Xiaoqing Yu; Yiwei Jiang
Journal:  Physiol Plant       Date:  2010-10-26       Impact factor: 4.500

Review 2.  Unique aspects of the grass cell wall.

Authors:  John Vogel
Journal:  Curr Opin Plant Biol       Date:  2008-04-21       Impact factor: 7.834

Review 3.  A fortunate choice: the history of Arabidopsis as a model plant.

Authors:  Chris Somerville; Maarten Koornneef
Journal:  Nat Rev Genet       Date:  2002-11       Impact factor: 53.242

4.  Setaria viridis: a model for C4 photosynthesis.

Authors:  Thomas P Brutnell; Lin Wang; Kerry Swartwood; Alexander Goldschmidt; David Jackson; Xin-Guang Zhu; Elizabeth Kellogg; Joyce Van Eck
Journal:  Plant Cell       Date:  2010-08-06       Impact factor: 11.277

5.  An SSR-based genetic linkage map of the model grass Brachypodium distachyon.

Authors:  David F Garvin; Neil McKenzie; John P Vogel; Todd C Mockler; Zachary J Blankenheim; Jonathan Wright; Jitender J S Cheema; Jo Dicks; Naxin Huo; Daniel M Hayden; Yong Gu; Christian Tobias; Jeff H Chang; Ashley Chu; Martin Trick; Todd P Michael; Michael W Bevan; John W Snape
Journal:  Genome       Date:  2010-01       Impact factor: 2.166

6.  The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences.

Authors:  Naxin Huo; Gerard R Lazo; John P Vogel; Frank M You; Yaqin Ma; Daniel M Hayden; Devin Coleman-Derr; Theresa A Hill; Jan Dvorak; Olin D Anderson; Ming-Cheng Luo; Yong Q Gu
Journal:  Funct Integr Genomics       Date:  2007-11-06       Impact factor: 3.410

7.  Development of SSR markers and analysis of diversity in Turkish populations of Brachypodium distachyon.

Authors:  John P Vogel; Metin Tuna; Hikmet Budak; Naxin Huo; Yong Q Gu; Michael A Steinwand
Journal:  BMC Plant Biol       Date:  2009-07-13       Impact factor: 4.215

8.  A T-DNA mutation in the RNA helicase eIF4A confers a dose-dependent dwarfing phenotype in Brachypodium distachyon.

Authors:  Philippe Vain; Vera Thole; Barbara Worland; Magdalena Opanowicz; Max S Bush; John H Doonan
Journal:  Plant J       Date:  2011-04-04       Impact factor: 6.417

9.  Investigations of barley stripe mosaic virus as a gene silencing vector in barley roots and in Brachypodium distachyon and oat.

Authors:  Andrzej Pacak; Katrin Geisler; Bodil Jørgensen; Maria Barciszewska-Pacak; Lena Nilsson; Tom Hamborg Nielsen; Elisabeth Johansen; Mette Grønlund; Iver Jakobsen; Merete Albrechtsen
Journal:  Plant Methods       Date:  2010-11-30       Impact factor: 4.993

10.  Brachypodium distachyon: a new pathosystem to study Fusarium head blight and other Fusarium diseases of wheat.

Authors:  Antoine Peraldi; Giovanni Beccari; Andrew Steed; Paul Nicholson
Journal:  BMC Plant Biol       Date:  2011-06-03       Impact factor: 4.215
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  109 in total

Review 1.  Natural genetic variation of root system architecture from Arabidopsis to Brachypodium: towards adaptive value.

Authors:  David Pacheco-Villalobos; Christian S Hardtke
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-06-05       Impact factor: 6.237

Review 2.  Plant immune responses against viruses: how does a virus cause disease?

Authors:  Kranthi K Mandadi; Karen-Beth G Scholthof
Journal:  Plant Cell       Date:  2013-05-24       Impact factor: 11.277

3.  Genomic architecture and functional relationships of intronless, constitutively- and alternatively-spliced genes in Brachypodium distachyon.

Authors:  Kranthi K Mandadi; Karen-Beth G Scholthof
Journal:  Plant Signal Behav       Date:  2015

4.  Characterization of SCL33 splicing patterns during diverse virus infections in Brachypodium distachyon.

Authors:  Kranthi K Mandadi; Jesse D Pyle; Karen-Beth G Scholthof
Journal:  Plant Signal Behav       Date:  2015

5.  Trait divergence, not plasticity, determines the success of a newly invasive plant.

Authors:  Gina L Marchini; Caitlin A Maraist; Mitchell B Cruzan
Journal:  Ann Bot       Date:  2019-03-14       Impact factor: 4.357

Review 6.  Prospects of pan-genomics in barley.

Authors:  Cécile Monat; Mona Schreiber; Nils Stein; Martin Mascher
Journal:  Theor Appl Genet       Date:  2018-11-16       Impact factor: 5.699

7.  Genome-wide analysis of alternative splicing landscapes modulated during plant-virus interactions in Brachypodium distachyon.

Authors:  Kranthi K Mandadi; Karen-Beth G Scholthof
Journal:  Plant Cell       Date:  2015-01-29       Impact factor: 11.277

8.  Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments.

Authors:  Vincent Chochois; John P Vogel; Gregory J Rebetzke; Michelle Watt
Journal:  Plant Physiol       Date:  2015-05-14       Impact factor: 8.340

9.  Regulation of FLOWERING LOCUS T by a microRNA in Brachypodium distachyon.

Authors:  Liang Wu; Dongfeng Liu; Jiajie Wu; Rongzhi Zhang; Zhengrui Qin; Danmei Liu; Aili Li; Daolin Fu; Wenxue Zhai; Long Mao
Journal:  Plant Cell       Date:  2013-11-27       Impact factor: 11.277

10.  Characterization of a viral synergism in the monocot Brachypodium distachyon reveals distinctly altered host molecular processes associated with disease.

Authors:  Kranthi K Mandadi; Karen-Beth G Scholthof
Journal:  Plant Physiol       Date:  2012-09-06       Impact factor: 8.340
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