Literature DB >> 18340042

Genomic evolution of the placenta using co-option and duplication and divergence.

Kirstin Knox1, Julie C Baker.   

Abstract

The invention of the placenta facilitated the evolution of mammals. How the placenta evolved from the simple structure observed in birds and reptiles into the complex organ that sustains human life is one of the great mysteries of evolution. By using a timecourse microarray analysis including the entire lifetime of the placenta, we uncover molecular and genomic changes that underlie placentation and find that two distinct evolutionary mechanisms were utilized during placental evolution in mice and human. Ancient genes involved in growth and metabolism were co-opted for use during early embryogenesis, likely enabling the accelerated development of extraembryonic tissues. Recently duplicated genes are utilized at later stages of placentation to meet the metabolic needs of a diverse range of pregnancy physiologies. Together, these mechanisms served to develop the specialized placenta, a novel structure that led to expansion of the eutherian mammal, including humankind.

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Mesh:

Year:  2008        PMID: 18340042      PMCID: PMC2336813          DOI: 10.1101/gr.071407.107

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  33 in total

1.  Redefined nomenclature for members of the carcinoembryonic antigen family.

Authors:  N Beauchemin; P Draber; G Dveksler; P Gold; S Gray-Owen; F Grunert; S Hammarström; K V Holmes; A Karlsson; M Kuroki; S H Lin; L Lucka; S M Najjar; M Neumaier; B Obrink; J E Shively; K M Skubitz; C P Stanners; P Thomas; J A Thompson; M Virji; S von Kleist; C Wagener; S Watt; W Zimmermann
Journal:  Exp Cell Res       Date:  1999-11-01       Impact factor: 3.905

Review 2.  Evolution of placental proteases.

Authors:  Robert W Mason; Deborah L Stabley; Gina N Picerno; Jennifer Frenck; Sixun Xing; Greg P Bertenshaw; Katia Sol-Church
Journal:  Biol Chem       Date:  2002 Jul-Aug       Impact factor: 3.915

Review 3.  Gene co-option in physiological and morphological evolution.

Authors:  John R True; Sean B Carroll
Journal:  Annu Rev Cell Dev Biol       Date:  2002-04-02       Impact factor: 13.827

Review 4.  Placental development: lessons from mouse mutants.

Authors:  J Rossant; J C Cross
Journal:  Nat Rev Genet       Date:  2001-07       Impact factor: 53.242

5.  Genomic analysis of gastrulation and organogenesis in the mouse.

Authors:  Nesanet Mitiku; Julie C Baker
Journal:  Dev Cell       Date:  2007-12       Impact factor: 12.270

6.  Large-scale analysis of the human and mouse transcriptomes.

Authors:  Andrew I Su; Michael P Cooke; Keith A Ching; Yaron Hakak; John R Walker; Tim Wiltshire; Anthony P Orth; Raquel G Vega; Lisa M Sapinoso; Aziz Moqrich; Ardem Patapoutian; Garret M Hampton; Peter G Schultz; John B Hogenesch
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

7.  Identification and characterization of a dense cluster of placenta-specific cysteine peptidase genes and related genes on mouse chromosome 13.

Authors:  Jan Deussing; Martin Kouadio; Salima Rehman; Ingrid Werber; Anne Schwinde; Christoph Peters
Journal:  Genomics       Date:  2002-02       Impact factor: 5.736

8.  Evolution of placentally expressed cathepsins.

Authors:  Katia Sol-Church; Gina N Picerno; Deborah L Stabley; Jennifer Frenck; Sixun Xing; Greg P Bertenshaw; Robert W Mason
Journal:  Biochem Biophys Res Commun       Date:  2002-04-26       Impact factor: 3.575

9.  Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection.

Authors:  C Li; W H Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

10.  Model-based analysis of oligonucleotide arrays: model validation, design issues and standard error application.

Authors:  C Li; W Hung Wong
Journal:  Genome Biol       Date:  2001-08-03       Impact factor: 13.583

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  52 in total

1.  RNA-seq analysis of the functional compartments within the rat placentation site.

Authors:  Kartik Shankar; Ying Zhong; Ping Kang; Michael L Blackburn; Michael J Soares; Thomas M Badger; Horacio Gomez-Acevedo
Journal:  Endocrinology       Date:  2012-02-21       Impact factor: 4.736

2.  Metabolomics in premature labor: a novel approach to identify patients at risk for preterm delivery.

Authors:  Roberto Romero; Shali Mazaki-Tovi; Edi Vaisbuch; Juan Pedro Kusanovic; Tinnakorn Chaiworapongsa; Ricardo Gomez; Jyh Kae Nien; Bo Hyun Yoon; Moshe Mazor; Jingqin Luo; David Banks; John Ryals; Chris Beecher
Journal:  J Matern Fetal Neonatal Med       Date:  2010-05-26

Review 3.  Epigenesis and plasticity of mouse trophoblast stem cells.

Authors:  Julie Prudhomme; Céline Morey
Journal:  Cell Mol Life Sci       Date:  2015-11-05       Impact factor: 9.261

4.  ACP5 (Uteroferrin): phylogeny of an ancient and conserved gene expressed in the endometrium of mammals.

Authors:  Maria B Padua; Vincent J Lynch; Natalia V Alvarez; Mark A Garthwaite; Thaddeus G Golos; Fuller W Bazer; Satyan Kalkunte; Surendra Sharma; Gunter P Wagner; Peter J Hansen
Journal:  Biol Reprod       Date:  2012-04-27       Impact factor: 4.285

5.  Examination of transcriptional networks reveals an important role for TCFAP2C, SMARCA4, and EOMES in trophoblast stem cell maintenance.

Authors:  Benjamin L Kidder; Stephen Palmer
Journal:  Genome Res       Date:  2010-02-22       Impact factor: 9.043

6.  Altered gene expression and spongiotrophoblast differentiation in placenta from a mouse model of diabetes in pregnancy.

Authors:  J M Salbaum; C Kruger; X Zhang; N Arbour Delahaye; G Pavlinkova; D H Burk; C Kappen
Journal:  Diabetologia       Date:  2011-04-14       Impact factor: 10.122

7.  Stereotypical alterations in cortical patterning are associated with maternal illness-induced placental dysfunction.

Authors:  Pamela A Carpentier; Ursula Haditsch; Amy E Braun; Andrea V Cantu; Hyang Mi Moon; Robin O Price; Matthew P Anderson; Vidya Saravanapandian; Khadija Ismail; Moises Rivera; James M Weimann; Theo D Palmer
Journal:  J Neurosci       Date:  2013-10-23       Impact factor: 6.167

8.  The core transcriptome of mammalian placentas and the divergence of expression with placental shape.

Authors:  Don L Armstrong; Michael R McGowen; Amy Weckle; Priyadarshini Pantham; Jason Caravas; Dalen Agnew; Kurt Benirschke; Sue Savage-Rumbaugh; Eviatar Nevo; Chong J Kim; Günter P Wagner; Roberto Romero; Derek E Wildman
Journal:  Placenta       Date:  2017-05-12       Impact factor: 3.481

9.  Sex differences in fetal growth responses to maternal height and weight.

Authors:  Michelle Lampl; Francesca Gotsch; Juan Pedro Kusanovic; Ricardo Gomez; Jyh Kae Nien; Edward A Frongillo; Roberto Romero
Journal:  Am J Hum Biol       Date:  2010 Jul-Aug       Impact factor: 1.937

10.  Early rapid growth, early birth: accelerated fetal growth and spontaneous late preterm birth.

Authors:  Michelle Lampl; Juan Pedro Kusanovic; Offer Erez; Jimmy Espinoza; Francesca Gotsch; Luis Goncalves; Sonia Hassan; Ricardo Gomez; Jyh Kae Nien; Edward A Frongillo; Roberto Romero
Journal:  Am J Hum Biol       Date:  2009 Mar-Apr       Impact factor: 1.937

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