Literature DB >> 18321976

Genomic analysis of closely related astroviruses.

Errol Strain1, Laura A Kelley, Stacey Schultz-Cherry, Spencer V Muse, Matthew D Koci.   

Abstract

To understand astrovirus biology, it is essential to understand factors associated with its evolution. The current study reports the genomic sequences of nine novel turkey astrovirus (TAstV) type 2-like clinical isolates. This represents, to our knowledge, the largest genomic-length data set available for any one astrovirus type. The comparison of these TAstV sequences suggests that the TAstV species contains multiple subtypes and that recombination events have occurred across the astrovirus genome. In addition, the analysis of the capsid gene demonstrated evidence for both site-specific positive selection and purifying selection.

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Year:  2008        PMID: 18321976      PMCID: PMC2346738          DOI: 10.1128/JVI.01993-07

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  27 in total

1.  Molecular characterization of an avian astrovirus.

Authors:  M D Koci; B S Seal; S Schultz-Cherry
Journal:  J Virol       Date:  2000-07       Impact factor: 5.103

2.  Complete genomic sequences of astroviruses from sheep and turkey: comparison with related viruses.

Authors:  Christine M Jonassen; Tom Ø Jonassen T; Torunn M Sveen; Bjørn Grinde
Journal:  Virus Res       Date:  2003-02       Impact factor: 3.303

3.  TOPALi: software for automatic identification of recombinant sequences within DNA multiple alignments.

Authors:  Iain Milne; Frank Wright; Glenn Rowe; David F Marshall; Dirk Husmeier; Gràinne McGuire
Journal:  Bioinformatics       Date:  2004-02-26       Impact factor: 6.937

4.  The electron microscopical and physical characteristics of small round human fecal viruses: an interim scheme for classification.

Authors:  E O Caul; H Appleton
Journal:  J Med Virol       Date:  1982       Impact factor: 2.327

5.  Detection of astroviruses in turkey faeces by direct electron microscopy.

Authors:  M S McNulty; W L Curran; J B McFerran
Journal:  Vet Rec       Date:  1980-06-28       Impact factor: 2.695

6.  Statistical tests for detecting gene conversion.

Authors:  S Sawyer
Journal:  Mol Biol Evol       Date:  1989-09       Impact factor: 16.240

7.  Evolutionary relationships among Astroviridae.

Authors:  Vladimir V Lukashov; Jaap Goudsmit
Journal:  J Gen Virol       Date:  2002-06       Impact factor: 3.891

Review 8.  Astrovirus infection in children.

Authors:  Jolan E Walter; Douglas K Mitchell
Journal:  Curr Opin Infect Dis       Date:  2003-06       Impact factor: 4.915

9.  Host-related nucleotide composition and codon usage as driving forces in the recent evolution of the Astroviridae.

Authors:  Formijn J van Hemert; Ben Berkhout; Vladimir V Lukashov
Journal:  Virology       Date:  2006-12-22       Impact factor: 3.616

10.  Molecular characterization of a novel recombinant strain of human astrovirus associated with gastroenteritis in children.

Authors:  J E Walter; J Briggs; M L Guerrero; D O Matson; L K Pickering; G Ruiz-Palacios; T Berke; D K Mitchell
Journal:  Arch Virol       Date:  2001-12       Impact factor: 2.574

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  23 in total

1.  Determination of the full length sequence of a chicken astrovirus suggests a different replication mechanism.

Authors:  Kyung-il Kang; Alan H Icard; Erich Linnemann; Holly S Sellers; Egbert Mundt
Journal:  Virus Genes       Date:  2011-08-31       Impact factor: 2.332

2.  A novel group of avian astroviruses in wild aquatic birds.

Authors:  Daniel K W Chu; Connie Y H Leung; Harsha K K Perera; Erica M Ng; Martin Gilbert; Priscilla H Joyner; Alessandro Grioni; Gary Ades; Yi Guan; Joseph S M Peiris; Leo L M Poon
Journal:  J Virol       Date:  2012-10-03       Impact factor: 5.103

Review 3.  Human astroviruses.

Authors:  Albert Bosch; Rosa M Pintó; Susana Guix
Journal:  Clin Microbiol Rev       Date:  2014-10       Impact factor: 26.132

4.  Insight into the Epidemiology and Evolutionary History of Novel Goose Astrovirus-Associated Gout in Goslings in Southern China.

Authors:  Xinliang Fu; Zhanpeng Hou; Wenjun Liu; Nan Cao; Yu Liang; Bingxin Li; Danli Jiang; Wanyan Li; Danning Xu; Yunbo Tian; Yunmao Huang
Journal:  Viruses       Date:  2022-06-15       Impact factor: 5.818

5.  Detection and characterization of avastrovirus associated with diarrhea isolated from minks in China.

Authors:  Na Sun; Yong Yang; Gui-Sheng Wang; Xi-Qun Shao; Shu-Qin Zhang; Feng-Xue Wang; Bin Tan; Fu-Lin Tian; Shi-Peng Cheng; Yong-Jun Wen
Journal:  Food Environ Virol       Date:  2014-06-11       Impact factor: 2.778

6.  Novel astroviruses in insectivorous bats.

Authors:  D K W Chu; L L M Poon; Y Guan; J S M Peiris
Journal:  J Virol       Date:  2008-06-11       Impact factor: 5.103

7.  Screening of feral and wood pigeons for viruses harbouring a conserved mobile viral element: characterization of novel Astroviruses and Picornaviruses.

Authors:  Tone Kofstad; Christine M Jonassen
Journal:  PLoS One       Date:  2011-10-17       Impact factor: 3.240

8.  Molecular epidemiology and phylogenetic analysis of diverse bovine astroviruses associated with diarrhea in cattle and water buffalo calves in China.

Authors:  Niyokwishimira Alfred; Huan Liu; Mu Lan Li; Shao Feng Hong; Hai Bo Tang; Zu Zhang Wei; Ying Chen; Fa Kai Li; Yi Zhi Zhong; Wei Jian Huang
Journal:  J Vet Med Sci       Date:  2015-02-13       Impact factor: 1.267

9.  Enteric viruses in turkey enteritis.

Authors:  Naresh Jindal; Sunil K Mor; Sagar M Goyal
Journal:  Virusdisease       Date:  2014-02-19

Review 10.  Intra- and Cross-Species Transmission of Astroviruses.

Authors:  Shanley N Roach; Ryan A Langlois
Journal:  Viruses       Date:  2021-06-11       Impact factor: 5.048

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