Literature DB >> 183204

Handedness of crossover connections in beta sheets.

J S Richardson.   

Abstract

In a crossover connection, the polypeptide chain leaves one end of a beta sheet, forms a loop of any length and any conformation, and reenters the same beta sheet from the opposite end. Of the 85 examples of crossover connections which occur in the known protein structures, 83 are righthanded and only two are lefthanded. It is proposed that consistent handedness, even in long irregular loops, could be produced by the preferred twist direction of extended chain and the righthandedness of alpha-helices, provided certain conditions hold during the protein folding process.

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Year:  1976        PMID: 183204      PMCID: PMC430699          DOI: 10.1073/pnas.73.8.2619

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Studies of asymmetry in the three-dimensional structure of lobster D-glyceraldehyde-3-phosphate dehydrogenase.

Authors:  D Moras; K W Olsen; M N Sabesan; M Buehner; G C Ford; M G Rossmann
Journal:  J Biol Chem       Date:  1975-12-10       Impact factor: 5.157

2.  Computer simulation of protein folding.

Authors:  M Levitt; A Warshel
Journal:  Nature       Date:  1975-02-27       Impact factor: 49.962

3.  Structure of chicken muscle triose phosphate isomerase determined crystallographically at 2.5 angstrom resolution using amino acid sequence data.

Authors:  D W Banner; A C Bloomer; G A Petsko; D C Phillips; C I Pogson; I A Wilson; P H Corran; A J Furth; J D Milman; R E Offord; J D Priddle; S G Waley
Journal:  Nature       Date:  1975-06-19       Impact factor: 49.962

4.  Some factors in the interpretation of protein denaturation.

Authors:  W KAUZMANN
Journal:  Adv Protein Chem       Date:  1959

5.  The covalent and three-dimensional structure of concanavalin A. IV. Atomic coordinates, hydrogen bonding, and quaternary structure.

Authors:  G N Reeke; J W Becker; G M Edelman
Journal:  J Biol Chem       Date:  1975-02-25       Impact factor: 5.157

6.  The double domain structure of rhodanese.

Authors:  J Bergsma; W G Hol; J N Jansonius; K H Kalk; J H Ploegman; J D Smit
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

7.  The structure of a yeast hexokinase monomer and its complexes with substrates at 2.7-A resolution.

Authors:  R J Fletterick; D J Bates; T A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  1975-01       Impact factor: 11.205

8.  Similarity of three-dimensional structure between the immunoglobulin domain and the copper, zinc superoxide dismutase subunit.

Authors:  J S Richardson; D C Richardson; K A Thomas; E W Silverton; D R Davies
Journal:  J Mol Biol       Date:  1976-04-05       Impact factor: 5.469

9.  The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain.

Authors:  L PAULING; R B COREY; H R BRANSON
Journal:  Proc Natl Acad Sci U S A       Date:  1951-04       Impact factor: 11.205

10.  Three-dimensional structure of Escherichia coli thioredoxin-S2 to 2.8 A resolution.

Authors:  A Holmgren; B O Söderberg; H Eklund; C I Brändén
Journal:  Proc Natl Acad Sci U S A       Date:  1975-06       Impact factor: 11.205

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  40 in total

1.  A global representation of the protein fold space.

Authors:  Jingtong Hou; Gregory E Sims; Chao Zhang; Sung-Hou Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-26       Impact factor: 11.205

Review 2.  Looking at proteins: representations, folding, packing, and design. Biophysical Society National Lecture, 1992.

Authors:  J S Richardson; D C Richardson; N B Tweedy; K M Gernert; T P Quinn; M H Hecht; B W Erickson; Y Yan; R D McClain; M E Donlan
Journal:  Biophys J       Date:  1992-11       Impact factor: 4.033

3.  Structure and inhibition of herpesvirus DNA packaging terminase nuclease domain.

Authors:  Marta Nadal; Philippe J Mas; Phillipe J Mas; Alexandre G Blanco; Carme Arnan; Maria Solà; Darren J Hart; Miquel Coll
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-30       Impact factor: 11.205

4.  Protein Design: Getting to the bottom of the TIM barrel.

Authors:  Vikas Nanda
Journal:  Nat Chem Biol       Date:  2016-01       Impact factor: 15.040

5.  Prediction of the structural motifs of sandwich proteins.

Authors:  A S Fokas; I M Gelfand; A E Kister
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-18       Impact factor: 11.205

6.  Structures of apo and complexed Escherichia coli glycinamide ribonucleotide transformylase.

Authors:  R J Almassy; C A Janson; C C Kan; Z Hostomska
Journal:  Proc Natl Acad Sci U S A       Date:  1992-07-01       Impact factor: 11.205

7.  Strict rules determine arrangements of strands in sandwich proteins.

Authors:  A E Kister; A S Fokas; T S Papatheodorou; I M Gelfand
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-02       Impact factor: 11.205

8.  RNA-binding domain of the A protein component of the U1 small nuclear ribonucleoprotein analyzed by NMR spectroscopy is structurally similar to ribosomal proteins.

Authors:  D W Hoffman; C C Query; B L Golden; S W White; J D Keene
Journal:  Proc Natl Acad Sci U S A       Date:  1991-03-15       Impact factor: 11.205

9.  Role of hydrophobicity and solvent-mediated charge-charge interactions in stabilizing alpha-helices.

Authors:  J A Vila; D R Ripoll; M E Villegas; Y N Vorobjev; H A Scheraga
Journal:  Biophys J       Date:  1998-12       Impact factor: 4.033

10.  Doing molecular biophysics: finding, naming, and picturing signal within complexity.

Authors:  Jane S Richardson; David C Richardson
Journal:  Annu Rev Biophys       Date:  2013-02-28       Impact factor: 12.981

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