Literature DB >> 18318862

The search finds an end: colpodidiids belong to the Class Nassophorea (ciliophora).

Hans-Werner Breiner1, Wilhelm Foissner, Thorsten Stoeck.   

Abstract

At its discovery in 1982, the ciliate genus Colpodidium was assigned to the Class Colpodea. Redescriptions of the type species Colpodidium caudatum caused the establishment of a new family (Colpodidiidae). Based on ontogenetic data, eventually a new order-Colpodidiida-was established and hypothesized to belong to the Class Nassophorea. Despite a remarkable increase in the number of colpodidiid species, no sequence data were available to confirm or reject either class assignment or to assess the phylogenetic validity of the Colpodidiidae and the Colpodidiida. We here retrieved and phylogenetically analyzed the SSrDNA sequences of C. caudatum from a Namibian soil and an as-yet undescribed colpodidiid ciliate from the Chobe River floodplain, Botswana. Bayesian inference methods and evolutionary distance analyses confirmed the assignment of these taxa to the class Nassophorea.

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Year:  2008        PMID: 18318862      PMCID: PMC2917744          DOI: 10.1111/j.1550-7408.2008.00307.x

Source DB:  PubMed          Journal:  J Eukaryot Microbiol        ISSN: 1066-5234            Impact factor:   3.346


  8 in total

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Journal:  Mol Biol Evol       Date:  2002-01       Impact factor: 16.240

2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

3.  Revised small subunit rRNA analysis provides further evidence that Foraminifera are related to Cercozoa.

Authors:  Cédric Berney; Jan Pawlowski
Journal:  J Mol Evol       Date:  2003       Impact factor: 2.395

4.  MODELTEST: testing the model of DNA substitution.

Authors:  D Posada; K A Crandall
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

5.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  Phylogenetic relationships of orders within the class colpodea (Phylum ciliophora) inferred from small subunit rRNA gene sequences

Authors: 
Journal:  J Mol Evol       Date:  1999-05       Impact factor: 2.395

7.  Dinoflagellate, Euglenid, or Cercomonad? The ultrastructure and molecular phylogenetic position of Protaspis grandis n. sp.

Authors:  Mona Hoppenrath; Brian S Leander
Journal:  J Eukaryot Microbiol       Date:  2006 Sep-Oct       Impact factor: 3.346

8.  Small-subunit rRNA Phylogenies Suggest That Epalxella antiquorum (penard, 1922) corliss, 1960 (ciliophora, odontostomatida) is a member of the plagyopylea.

Authors:  Thorsten Stoeck; Wilhelm Foissner; Denis H Lynn
Journal:  J Eukaryot Microbiol       Date:  2007 Sep-Oct       Impact factor: 3.346

  8 in total
  1 in total

1.  Morphological and molecular characterization of a new protist family, Sandmanniellidae n. fam. (Ciliophora, Colpodea), with description of Sandmanniella terricola n. g., n. sp. from the Chobe floodplain in Botswana.

Authors:  Wilhelm Foissner; Thorsten Stoeck
Journal:  J Eukaryot Microbiol       Date:  2009 Sep-Oct       Impact factor: 3.346

  1 in total

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