Literature DB >> 18316240

Genetic variation in rice.

Kazuyuki Doi1, Hideshi Yasui, Atsushi Yoshimura.   

Abstract

Completion of the genomic sequencing of rice has enhanced the discovery of new genes. Wild rice relatives are good sources for extending the genetic variation of cultivated rice. Reproductive barriers are commonly found in distant crosses of rice and are attracting attention. The combination of genetic analyses and molecular tools has greatly facilitated the molecular cloning of rice genes based on the classical approach and enabled the tracking of dissemination of the alleles for domestication. Basic information for population genetics study in rice is still being collected and is expected to provide an alternative approach for finding new genes. The wide genetic variation available in wild rice relatives and the combination of various genetic approaches will allow the analysis and understanding of genetic variation at the nucleotide sequence level, as well as the discovery of novel alleles by sequence-based approaches.

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Year:  2008        PMID: 18316240     DOI: 10.1016/j.pbi.2008.01.008

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  9 in total

1.  Independent evolution of a new allele of F1 pollen sterility gene S27 encoding mitochondrial ribosomal protein L27 in Oryza nivara.

Authors:  Khin Thanda Win; Yoshiyuki Yamagata; Yuta Miyazaki; Kazuyuki Doi; Hideshi Yasui; Atsushi Yoshimura
Journal:  Theor Appl Genet       Date:  2010-09-28       Impact factor: 5.699

2.  Identification of QTLs for seed germination capability after various storage periods using two RIL populations in rice.

Authors:  Wenzhu Jiang; Joohyun Lee; Yong-Mei Jin; Yongli Qiao; Rihua Piao; Sun Mi Jang; Mi-Ok Woo; Soon-Wook Kwon; Xianhu Liu; Hong-Yu Pan; Xinglin Du; Hee-Jong Koh
Journal:  Mol Cells       Date:  2011-03-09       Impact factor: 5.034

Review 3.  How important are transposons for plant evolution?

Authors:  Damon Lisch
Journal:  Nat Rev Genet       Date:  2013-01       Impact factor: 53.242

4.  Lineage-specific gene acquisition or loss is involved in interspecific hybrid sterility in rice.

Authors:  Yohei Koide; Atsushi Ogino; Takanori Yoshikawa; Yuki Kitashima; Nozomi Saito; Yoshitaka Kanaoka; Kazumitsu Onishi; Yoshihiro Yoshitake; Takuji Tsukiyama; Hiroki Saito; Masayoshi Teraishi; Yoshiyuki Yamagata; Aiko Uemura; Hiroki Takagi; Yoriko Hayashi; Tomoko Abe; Yoshimichi Fukuta; Yutaka Okumoto; Akira Kanazawa
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-14       Impact factor: 11.205

5.  Effect of multiple allelic combinations of genes on regulating grain size in rice.

Authors:  Umakanta Ngangkham; Sanghamitra Samantaray; Manoj Kumar Yadav; Awadhesh Kumar; Parameswaran Chidambaranathan; Jawahar Lal Katara
Journal:  PLoS One       Date:  2018-01-05       Impact factor: 3.240

6.  Phenotypic Diagnosis of Lineage and Differentiation During Sake Yeast Breeding.

Authors:  Shinsuke Ohnuki; Hiroki Okada; Anne Friedrich; Yoichiro Kanno; Tetsuya Goshima; Hirokazu Hasuda; Masaaki Inahashi; Naoto Okazaki; Hiroyasu Tamura; Ryo Nakamura; Dai Hirata; Hisashi Fukuda; Hitoshi Shimoi; Katsuhiko Kitamoto; Daisuke Watanabe; Joseph Schacherer; Takeshi Akao; Yoshikazu Ohya
Journal:  G3 (Bethesda)       Date:  2017-08-07       Impact factor: 3.154

7.  A walk on the wild side: Oryza species as source for rice abiotic stress tolerance.

Authors:  Paloma Koprovski Menguer; Raul Antonio Sperotto; Felipe Klein Ricachenevsky
Journal:  Genet Mol Biol       Date:  2017-03-20       Impact factor: 1.771

8.  Detection of quantitative trait loci controlling grain zinc concentration using Australian wild rice, Oryza meridionalis, a potential genetic resource for biofortification of rice.

Authors:  Ryo Ishikawa; Masahide Iwata; Kenta Taniko; Gotaro Monden; Naoya Miyazaki; Chhourn Orn; Yuki Tsujimura; Shusaku Yoshida; Jian Feng Ma; Takashige Ishii
Journal:  PLoS One       Date:  2017-10-27       Impact factor: 3.240

9.  Substitution Mapping of the Major Quantitative Trait Loci Controlling Stigma Exsertion Rate from Oryza glumaepatula.

Authors:  Quanya Tan; Tuo Zou; Mingmin Zheng; Yuerong Ni; Xin Luan; Xiaohui Li; Weifeng Yang; Zifeng Yang; Haitao Zhu; Ruizhen Zeng; Guifu Liu; Shaokui Wang; Xuelin Fu; Guiquan Zhang
Journal:  Rice (N Y)       Date:  2020-06-09       Impact factor: 4.783

  9 in total

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