Literature DB >> 18297074

Association between the Igk and Igh immunoglobulin loci mediated by the 3' Igk enhancer induces 'decontraction' of the Igh locus in pre-B cells.

Susannah L Hewitt1, Deborah Farmer, Katarzyna Marszalek, Emily Cadera, Hong-Erh Liang, Yang Xu, Mark S Schlissel, Jane A Skok.   

Abstract

Variable-(diversity)-joining (V(D)J) recombination at loci encoding the immunoglobulin heavy chain (Igh) and immunoglobulin light chain (Igk) takes place sequentially during successive stages in B cell development. Using three-dimensional DNA fluorescence in situ hybridization, here we identify a lineage-specific and stage-specific interchromosomal association between these two loci that marks the transition between Igh and Igk recombination. Colocalization occurred between pericentromerically located alleles in pre-B cells and was mediated by the 3' Igk enhancer. Deletion of this regulatory element prevented association of the Igh and Igk loci, inhibited pericentromeric recruitment and locus 'decontraction' of an Igh allele, and resulted in greater distal rearrangement of the gene encoding the variable heavy-chain region. Our data indicate involvement of the Igk locus and its 3' enhancer in directing the Igh locus to a repressive nuclear subcompartment and inducing the Igh locus to decontract.

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Year:  2008        PMID: 18297074      PMCID: PMC2583163          DOI: 10.1038/ni1567

Source DB:  PubMed          Journal:  Nat Immunol        ISSN: 1529-2908            Impact factor:   25.606


  23 in total

1.  Nonequivalent nuclear location of immunoglobulin alleles in B lymphocytes.

Authors:  J A Skok; K E Brown; V Azuara; M L Caparros; J Baxter; K Takacs; N Dillon; D Gray; R P Perry; M Merkenschlager; A G Fisher
Journal:  Nat Immunol       Date:  2001-09       Impact factor: 25.606

2.  Subnuclear compartmentalization of immunoglobulin loci during lymphocyte development.

Authors:  Steven T Kosak; Jane A Skok; Kay L Medina; Roy Riblet; Michelle M Le Beau; Amanda G Fisher; Harinder Singh
Journal:  Science       Date:  2002-04-05       Impact factor: 47.728

3.  Pax-5 is essential for kappa sterile transcription during Ig kappa chain gene rearrangement.

Authors:  Hiromu Sato; Fumiko Saito-Ohara; Johji Inazawa; Akira Kudo
Journal:  J Immunol       Date:  2004-04-15       Impact factor: 5.422

4.  Epigenetic ontogeny of the Igk locus during B cell development.

Authors:  Maya Goldmit; Yanhong Ji; Jane Skok; Esther Roldan; Steffen Jung; Howard Cedar; Yehudit Bergman
Journal:  Nat Immunol       Date:  2004-12-26       Impact factor: 25.606

5.  Interchromosomal associations between alternatively expressed loci.

Authors:  Charalampos G Spilianakis; Maria D Lalioti; Terrence Town; Gap Ryol Lee; Richard A Flavell
Journal:  Nature       Date:  2005-05-08       Impact factor: 49.962

6.  Transient IL-7/IL-7R signaling provides a mechanism for feedback inhibition of immunoglobulin heavy chain gene rearrangements.

Authors:  Dipanjan Chowdhury; Ranjan Sen
Journal:  Immunity       Date:  2003-02       Impact factor: 31.745

7.  Pax5 induces V-to-DJ rearrangements and locus contraction of the immunoglobulin heavy-chain gene.

Authors:  Martin Fuxa; Jane Skok; Abdallah Souabni; Giorgia Salvagiotto; Esther Roldan; Meinrad Busslinger
Journal:  Genes Dev       Date:  2004-02-15       Impact factor: 11.361

8.  IL-2 receptor alpha chain (CD25, TAC) expression defines a crucial stage in pre-B cell development.

Authors:  A Rolink; U Grawunder; T H Winkler; H Karasuyama; F Melchers
Journal:  Int Immunol       Date:  1994-08       Impact factor: 4.823

9.  Virus-transformed pre-B cells show ordered activation but not inactivation of immunoglobulin gene rearrangement and transcription.

Authors:  M S Schlissel; L M Corcoran; D Baltimore
Journal:  J Exp Med       Date:  1991-03-01       Impact factor: 14.307

10.  Ordered rearrangement of immunoglobulin heavy chain variable region segments.

Authors:  F W Alt; G D Yancopoulos; T K Blackwell; C Wood; E Thomas; M Boss; R Coffman; N Rosenberg; S Tonegawa; D Baltimore
Journal:  EMBO J       Date:  1984-06       Impact factor: 11.598

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  40 in total

1.  Central B-cell tolerance: where selection begins.

Authors:  Roberta Pelanda; Raul M Torres
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-04-01       Impact factor: 10.005

Review 2.  Something silent this way forms: the functional organization of the repressive nuclear compartment.

Authors:  Joan C Ritland Politz; David Scalzo; Mark Groudine
Journal:  Annu Rev Cell Dev Biol       Date:  2013-07-05       Impact factor: 13.827

3.  Interpreting 4C-Seq data: how far can we go?

Authors:  Ramya Raviram; Pedro P Rocha; Richard Bonneau; Jane A Skok
Journal:  Epigenomics       Date:  2014       Impact factor: 4.778

Review 4.  Long-Range Regulation of V(D)J Recombination.

Authors:  Charlotte Proudhon; Bingtao Hao; Ramya Raviram; Julie Chaumeil; Jane A Skok
Journal:  Adv Immunol       Date:  2015-08-20       Impact factor: 3.543

5.  Epigenetic control of immunity.

Authors:  Meinrad Busslinger; Alexander Tarakhovsky
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-06-02       Impact factor: 10.005

6.  A multifunctional element in the mouse Igκ locus that specifies repertoire and Ig loci subnuclear location.

Authors:  Yougui Xiang; Xiaorong Zhou; Susannah L Hewitt; Jane A Skok; William T Garrard
Journal:  J Immunol       Date:  2011-03-25       Impact factor: 5.422

7.  Variegated gene expression caused by cell-specific long-range DNA interactions.

Authors:  Daan Noordermeer; Elzo de Wit; Petra Klous; Harmen van de Werken; Marieke Simonis; Melissa Lopez-Jones; Bert Eussen; Annelies de Klein; Robert H Singer; Wouter de Laat
Journal:  Nat Cell Biol       Date:  2011-06-26       Impact factor: 28.824

8.  Elements between the IgH variable (V) and diversity (D) clusters influence antisense transcription and lineage-specific V(D)J recombination.

Authors:  Cosmas C Giallourakis; Andrew Franklin; Chunguang Guo; Hwei-Ling Cheng; Hye Suk Yoon; Michael Gallagher; Thomas Perlot; Milena Andzelm; Andrew J Murphy; Lynn E Macdonald; George D Yancopoulos; Frederick W Alt
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-01       Impact factor: 11.205

9.  Regulated large-scale nucleosome density patterns and precise nucleosome positioning correlate with V(D)J recombination.

Authors:  Sandhya R Pulivarthy; Mattia Lion; Guray Kuzu; Adam G W Matthews; Mark L Borowsky; John Morris; Robert E Kingston; Jonathan H Dennis; Michael Y Tolstorukov; Marjorie A Oettinger
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-03       Impact factor: 11.205

10.  Epigenetic regulation of antigen receptor gene rearrangement.

Authors:  Salvatore Spicuglia; Joaquin Zacarias-Cabeza; Aleksandra Pekowska; Pierre Ferrier
Journal:  F1000 Biol Rep       Date:  2010-03-25
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