Literature DB >> 18293327

Whole genome amplification using single-primer PCR.

Kaiqin Lao1, Nan Lan Xu, Neil A Straus.   

Abstract

Comprehensive genomic molecular analyses require relatively large DNA amounts that are often not available from forensic, clinical and other crucial biological samples. Numerous methods to amplify the whole genome have been proposed for cancer, forensic and taxonomic research. Unfortunately, when using truly random primers for the initial priming step, all of these procedures suffer from high background problems for sub-nanogram quantities of input DNA. Here we report an approach to eliminate this problem for PCR-based methods even at levels of DNA approaching that of a single cell.

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Year:  2008        PMID: 18293327     DOI: 10.1002/biot.200700253

Source DB:  PubMed          Journal:  Biotechnol J        ISSN: 1860-6768            Impact factor:   4.677


  8 in total

1.  Single-cell analyses of transcriptional heterogeneity during drug tolerance transition in cancer cells by RNA sequencing.

Authors:  Mei-Chong Wendy Lee; Fernando J Lopez-Diaz; Shahid Yar Khan; Muhammad Akram Tariq; Yelena Dayn; Charles Joseph Vaske; Amie J Radenbaugh; Hyunsung John Kim; Beverly M Emerson; Nader Pourmand
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-22       Impact factor: 11.205

2.  Genome-wide detection of single-nucleotide and copy-number variations of a single human cell.

Authors:  Chenghang Zong; Sijia Lu; Alec R Chapman; X Sunney Xie
Journal:  Science       Date:  2012-12-21       Impact factor: 47.728

Review 3.  Genomic analysis at the single-cell level.

Authors:  Tomer Kalisky; Paul Blainey; Stephen R Quake
Journal:  Annu Rev Genet       Date:  2011-09-19       Impact factor: 16.830

4.  Digital MDA for enumeration of total nucleic acid contamination.

Authors:  Paul C Blainey; Stephen R Quake
Journal:  Nucleic Acids Res       Date:  2010-11-11       Impact factor: 16.971

5.  Coupling technique of random amplified polymorphic DNA and nanoelectrochemical sensor for mapping pancreatic cancer genetic fingerprint.

Authors:  Qicai Liu; Ailin Liu; Feng Gao; Shaohuang Weng; Guangxian Zhong; Jingfeng Liu; Xinhua Lin; Jian-hua Lin; Xuhai Chen
Journal:  Int J Nanomedicine       Date:  2011-11-21

6.  Microplate-based platform for combined chromatin and DNA methylation immunoprecipitation assays.

Authors:  Jingjing Yu; Qinghua Feng; Yusong Ruan; Radko Komers; Nancy Kiviat; Karol Bomsztyk
Journal:  BMC Mol Biol       Date:  2011-11-18       Impact factor: 2.946

7.  Comparison of Multiple Displacement Amplification (MDA) and Multiple Annealing and Looping-Based Amplification Cycles (MALBAC) in Limited DNA Sequencing Based on Tube and Droplet.

Authors:  Xiaoxiang Zhou; Ying Xu; Libo Zhu; Zhen Su; Xiaoming Han; Zhen Zhang; Yan Huang; Quanjun Liu
Journal:  Micromachines (Basel)       Date:  2020-06-29       Impact factor: 2.891

8.  Comparison of multiple displacement amplification (MDA) and multiple annealing and looping-based amplification cycles (MALBAC) in single-cell sequencing.

Authors:  Minfeng Chen; Pengfei Song; Dan Zou; Xuesong Hu; Shancen Zhao; Shengjie Gao; Fei Ling
Journal:  PLoS One       Date:  2014-12-08       Impact factor: 3.240

  8 in total

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