Literature DB >> 18285480

A chemical genomic screen in Saccharomyces cerevisiae reveals a role for diphthamidation of translation elongation factor 2 in inhibition of protein synthesis by sordarin.

Javier Botet1, María Rodríguez-Mateos, Juan P G Ballesta, José Luis Revuelta, Miguel Remacha.   

Abstract

Sordarin and its derivatives are antifungal compounds of potential clinical interest. Despite the highly conserved nature of the fungal and mammalian protein synthesis machineries, sordarin is a selective inhibitor of protein synthesis in fungal organisms. In cells sensitive to sordarin, its mode of action is through preventing the release of translation elongation factor 2 (eEF2) during the translocation step, thus blocking protein synthesis. To further investigate the cellular components required for the effects of sordarin in fungal cells, we have used the haploid deletion collection of Saccharomyces cerevisiae to systematically identify genes whose deletion confers sensitivity or resistance to the compound. Our results indicate that genes in a number of cellular pathways previously unknown to play a role in sordarin response are involved in its growth effects on fungal cells and reveal a specific requirement for the diphthamidation pathway of cells in causing eEF2 to be sensitive to the effects of sordarin on protein synthesis. Our results underscore the importance of the powerful genomic tools developed in yeast (Saccharomyces cerevisiae) to more comprehensively understanding the cellular mechanisms involved in the response to therapeutic agents.

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Year:  2008        PMID: 18285480      PMCID: PMC2346624          DOI: 10.1128/AAC.01603-07

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN: 0066-4804            Impact factor:   5.191


  48 in total

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Review 2.  Antimicrobials: modes of action and mechanisms of resistance.

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4.  Species-specific inhibition of fungal protein synthesis by sordarin: identification of a sordarin-specificity region in eukaryotic elongation factor 2.

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Journal:  Microbiology (Reading)       Date:  2001-02       Impact factor: 2.777

5.  Role of the ribosomal stalk components in the resistance of Aspergillus fumigatus to the sordarin antifungals.

Authors:  Cruz Santos; Juan P G Ballesta
Journal:  Mol Microbiol       Date:  2002-01       Impact factor: 3.501

6.  KTI11 and KTI13, Saccharomyces cerevisiae genes controlling sensitivity to G1 arrest induced by Kluyveromyces lactis zymocin.

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Journal:  Mol Microbiol       Date:  2002-05       Impact factor: 3.501

7.  Activities of sordarins in experimental models of candidiasis, aspergillosis, and pneumocystosis.

Authors:  A Martinez; P Aviles; E Jimenez; J Caballero; D Gargallo-Viola
Journal:  Antimicrob Agents Chemother       Date:  2000-12       Impact factor: 5.191

8.  Functional profiling of the Saccharomyces cerevisiae genome.

Authors:  Guri Giaever; Angela M Chu; Li Ni; Carla Connelly; Linda Riles; Steeve Véronneau; Sally Dow; Ankuta Lucau-Danila; Keith Anderson; Bruno André; Adam P Arkin; Anna Astromoff; Mohamed El-Bakkoury; Rhonda Bangham; Rocio Benito; Sophie Brachat; Stefano Campanaro; Matt Curtiss; Karen Davis; Adam Deutschbauer; Karl-Dieter Entian; Patrick Flaherty; Francoise Foury; David J Garfinkel; Mark Gerstein; Deanna Gotte; Ulrich Güldener; Johannes H Hegemann; Svenja Hempel; Zelek Herman; Daniel F Jaramillo; Diane E Kelly; Steven L Kelly; Peter Kötter; Darlene LaBonte; David C Lamb; Ning Lan; Hong Liang; Hong Liao; Lucy Liu; Chuanyun Luo; Marc Lussier; Rong Mao; Patrice Menard; Siew Loon Ooi; Jose L Revuelta; Christopher J Roberts; Matthias Rose; Petra Ross-Macdonald; Bart Scherens; Greg Schimmack; Brenda Shafer; Daniel D Shoemaker; Sharon Sookhai-Mahadeo; Reginald K Storms; Jeffrey N Strathern; Giorgio Valle; Marleen Voet; Guido Volckaert; Ching-yun Wang; Teresa R Ward; Julie Wilhelmy; Elizabeth A Winzeler; Yonghong Yang; Grace Yen; Elaine Youngman; Kexin Yu; Howard Bussey; Jef D Boeke; Michael Snyder; Peter Philippsen; Ronald W Davis; Mark Johnston
Journal:  Nature       Date:  2002-07-25       Impact factor: 49.962

9.  Systematic screen for human disease genes in yeast.

Authors:  Lars M Steinmetz; Curt Scharfe; Adam M Deutschbauer; Dejana Mokranjac; Zelek S Herman; Ted Jones; Angela M Chu; Guri Giaever; Holger Prokisch; Peter J Oefner; Ronald W Davis
Journal:  Nat Genet       Date:  2002-07-22       Impact factor: 38.330

10.  Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method.

Authors:  R Daniel Gietz; Robin A Woods
Journal:  Methods Enzymol       Date:  2002       Impact factor: 1.600

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Journal:  ACS Chem Biol       Date:  2013-10-29       Impact factor: 5.100

2.  Functional analysis of the uL11 protein impact on translational machinery.

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Journal:  Cell Cycle       Date:  2016       Impact factor: 4.534

3.  Yeast ribosomal protein L40 assembles late into precursor 60 S ribosomes and is required for their cytoplasmic maturation.

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Review 4.  The yeast sphingolipid signaling landscape.

Authors:  David J Montefusco; Nabil Matmati; Yusuf A Hannun
Journal:  Chem Phys Lipids       Date:  2013-11-09       Impact factor: 3.329

5.  Astaxanthin protects oxidative stress mediated DNA damage and enhances longevity in Saccharomyces cerevisiae.

Authors:  S J Sudharshan; Madhu Dyavaiah
Journal:  Biogerontology       Date:  2020-10-27       Impact factor: 4.277

6.  Comparative genomic analysis of the DUF71/COG2102 family predicts roles in diphthamide biosynthesis and B12 salvage.

Authors:  Valérie de Crécy-Lagard; Farhad Forouhar; Céline Brochier-Armanet; Liang Tong; John F Hunt
Journal:  Biol Direct       Date:  2012-09-26       Impact factor: 4.540

7.  De novo GTP biosynthesis is critical for virulence of the fungal pathogen Cryptococcus neoformans.

Authors:  Carl A Morrow; Eugene Valkov; Anna Stamp; Eve W L Chow; I Russel Lee; Ania Wronski; Simon J Williams; Justine M Hill; Julianne T Djordjevic; Ulrike Kappler; Bostjan Kobe; James A Fraser
Journal:  PLoS Pathog       Date:  2012-10-11       Impact factor: 6.823

8.  The amidation step of diphthamide biosynthesis in yeast requires DPH6, a gene identified through mining the DPH1-DPH5 interaction network.

Authors:  Shanow Uthman; Christian Bär; Viktor Scheidt; Shihui Liu; Sara ten Have; Flaviano Giorgini; Michael J R Stark; Raffael Schaffrath
Journal:  PLoS Genet       Date:  2013-02-28       Impact factor: 5.917

9.  Insights into diphthamide, key diphtheria toxin effector.

Authors:  Wael Abdel-Fattah; Viktor Scheidt; Shanow Uthman; Michael J R Stark; Raffael Schaffrath
Journal:  Toxins (Basel)       Date:  2013-05-03       Impact factor: 4.546

10.  Genome-wide analysis of factors affecting transcription elongation and DNA repair: a new role for PAF and Ccr4-not in transcription-coupled repair.

Authors:  Hélène Gaillard; Cristina Tous; Javier Botet; Cristina González-Aguilera; Maria José Quintero; Laia Viladevall; María L García-Rubio; Alfonso Rodríguez-Gil; Antonio Marín; Joaquín Ariño; José Luis Revuelta; Sebastián Chávez; Andrés Aguilera
Journal:  PLoS Genet       Date:  2009-02-06       Impact factor: 5.917

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