Literature DB >> 18282130

Sex-specific genetic loci for femoral neck bone mass and strength identified in inbred COP and DA rats.

Imranul Alam1, Qiwei Sun, Lixiang Liu, Daniel L Koller, Lucinda G Carr, Michael J Econs, Tatiana Foroud, Charles H Turner.   

Abstract

INTRODUCTION: Hip fracture is the most devastating osteoporotic fracture type with significant morbidity and mortality. Several studies in humans identified chromosomal regions linked to hip size and bone mass. Animal models, particularly the inbred rat, serve as complementary approaches for studying the genetic influence on hip fragility. The purpose of this study is to identify sex-independent and sex-specific quantitative trait loci (QTLs) for femoral neck density, structure, and strength in inbred Copenhagen 2331 (COP) and Dark Agouti (DA) rats.
MATERIALS AND METHODS: A total of 828 (405 males and 423 females) F(2) progeny derived from the inbred COP and DA strains of rats were phenotyped for femoral neck volumetric BMD (vBMD), cross-sectional area, polar moment of inertia (Ip), neck width, ultimate force, and energy to break. A whole genome screen was performed using 93 microsatellite markers with an average intermarker distance of 20 cM. Recombination-based marker maps were generated using MAPMAKER/EXP from the COP x DA F(2) data and compared with published Rat Genome Database (RGD) maps. These maps were used for genome-wide linkage analyses to detect sex-independent and sex-specific QTLs.
RESULTS: Significant evidence of linkage (p < 0.01) for sex-independent QTLs were detected for (1) femoral neck vBMD on chromosomes (Chrs) 1, 6, 10, and 12, (2) femoral neck structure on Chrs 5, 7, 10, and 18, and (3) biomechanical properties on Chrs 1 and 4. Male-specific QTLs were discovered on Chrs 2, 9, and 18 for total vBMD, on Chr 17 for trabecular vBMD, on Chr 9 for total bone area, and on Chr 15 for ultimate force. A female-specific QTL was discovered on Chr 2 for ultimate force. The effect size of the individual QTL varied between 1% and 4%.
CONCLUSIONS: We detected evidence that sex-independent and sex-specific QTLs contribute to hip fragility in the inbred rat. Several QTLs regions identified in this study are homologous to human chromosomal regions previously linked to QTLs contributing to femoral neck and related phenotypes.

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Year:  2008        PMID: 18282130      PMCID: PMC2677085          DOI: 10.1359/jbmr.080221

Source DB:  PubMed          Journal:  J Bone Miner Res        ISSN: 0884-0431            Impact factor:   6.741


  37 in total

1.  Genome screen for quantitative trait loci underlying normal variation in femoral structure.

Authors:  D L Koller; G Liu; M J Econs; S L Hui; P A Morin; G Joslyn; L A Rodriguez; P M Conneally; J C Christian; C C Johnston; T Foroud; M Peacock
Journal:  J Bone Miner Res       Date:  2001-06       Impact factor: 6.741

2.  Comparison of genome screens for two independent cohorts provides replication of suggestive linkage of bone mineral density to 3p21 and 1p36.

Authors:  S G Wilson; P W Reed; A Bansal; M Chiano; M Lindersson; M Langdown; R L Prince; D Thompson; E Thompson; M Bailey; P W Kleyn; P Sambrook; M M Shi; T D Spector
Journal:  Am J Hum Genet       Date:  2002-12-11       Impact factor: 11.025

3.  R/qtl: QTL mapping in experimental crosses.

Authors:  Karl W Broman; Hao Wu; Saunak Sen; Gary A Churchill
Journal:  Bioinformatics       Date:  2003-05-01       Impact factor: 6.937

4.  Linkage of structure at the proximal femur to chromosomes 3, 7, 8, and 19.

Authors:  D L Koller; K E White; G Liu; S L Hui; P M Conneally; C C Johnston; M J Econs; T Foroud; M Peacock
Journal:  J Bone Miner Res       Date:  2003-06       Impact factor: 6.741

5.  A whole-genome linkage scan suggests several genomic regions potentially containing quantitative trait Loci for osteoporosis.

Authors:  Hong-Wen Deng; Fu-Hua Xu; Qing-Yang Huang; Hui Shen; Hongyi Deng; Theresa Conway; Yong-Jun Liu; Yao-Zhong Liu; Jin-Long Li; Hai-Tao Zhang; K M Davies; Robert R Recker
Journal:  J Clin Endocrinol Metab       Date:  2002-11       Impact factor: 5.958

6.  Variability in skeletal mass, structure, and biomechanical properties among inbred strains of rats.

Authors:  C H Turner; R K Roeder; A Wieczorek; T Foroud; G Liu; M Peacock
Journal:  J Bone Miner Res       Date:  2001-08       Impact factor: 6.741

Review 7.  Genetics of osteoporosis.

Authors:  Munro Peacock; Charles H Turner; Michael J Econs; Tatiana Foroud
Journal:  Endocr Rev       Date:  2002-06       Impact factor: 19.871

8.  BMD at multiple sites and risk of fracture of multiple types: long-term results from the Study of Osteoporotic Fractures.

Authors:  Katie L Stone; Dana G Seeley; Li-Yung Lui; Jane A Cauley; Kristine Ensrud; Warren S Browner; Michael C Nevitt; Steven R Cummings
Journal:  J Bone Miner Res       Date:  2003-11       Impact factor: 6.741

9.  Genome screen for quantitative trait loci contributing to normal variation in bone mineral density: the Framingham Study.

Authors:  D Karasik; R H Myers; L A Cupples; M T Hannan; D R Gagnon; A Herbert; D P Kiel
Journal:  J Bone Miner Res       Date:  2002-09       Impact factor: 6.741

10.  Two inbred rat strains that differ substantially in hip fragility.

Authors:  Q Sun; C H Turner
Journal:  Calcif Tissue Int       Date:  2003-01-15       Impact factor: 4.333

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  9 in total

1.  Fine mapping of bone structure and strength QTLs in heterogeneous stock rat.

Authors:  Imranul Alam; Daniel L Koller; Toni Cañete; Gloria Blázquez; Carme Mont-Cardona; Regina López-Aumatell; Esther Martínez-Membrives; Sira Díaz-Morán; Adolf Tobeña; Alberto Fernández-Teruel; Pernilla Stridh; Margarita Diez; Tomas Olsson; Martina Johannesson; Amelie Baud; Michael J Econs; Tatiana Foroud
Journal:  Bone       Date:  2015-08-19       Impact factor: 4.398

2.  Heterogeneous stock rat: a unique animal model for mapping genes influencing bone fragility.

Authors:  Imranul Alam; Daniel L Koller; Qiwei Sun; Ryan K Roeder; Toni Cañete; Gloria Blázquez; Regina López-Aumatell; Esther Martínez-Membrives; Elia Vicens-Costa; Carme Mont; Sira Díaz; Adolf Tobeña; Alberto Fernández-Teruel; Adam Whitley; Pernilla Strid; Margarita Diez; Martina Johannesson; Jonathan Flint; Michael J Econs; Charles H Turner; Tatiana Foroud
Journal:  Bone       Date:  2011-02-18       Impact factor: 4.398

Review 3.  Genetic regulation of bone strength: a review of animal model studies.

Authors:  Douglas J Adams; Cheryl L Ackert-Bicknell
Journal:  Bonekey Rep       Date:  2015-07-08

4.  Differentially expressed genes strongly correlated with femur strength in rats.

Authors:  Imranul Alam; Qiwei Sun; Daniel L Koller; Lixiang Liu; Yunlong Liu; Howard J Edenberg; Jiliang Li; Tatiana Foroud; Charles H Turner
Journal:  Genomics       Date:  2009-05-29       Impact factor: 5.736

5.  Genomic expression analysis of rat chromosome 4 for skeletal traits at femoral neck.

Authors:  Imranul Alam; Qiwei Sun; Lixiang Liu; Daniel L Koller; Yunlong Liu; Howard J Edenberg; Michael J Econs; Tatiana Foroud; Charles H Turner
Journal:  Physiol Genomics       Date:  2008-08-26       Impact factor: 3.107

6.  High-resolution genome screen for bone mineral density in heterogeneous stock rat.

Authors:  Imranul Alam; Daniel L Koller; Toni Cañete; Gloria Blázquez; Regina López-Aumatell; Esther Martínez-Membrives; Sira Díaz-Morán; Adolf Tobeña; Alberto Fernández-Teruel; Pernilla Stridh; Margarita Diez; Tomas Olsson; Martina Johannesson; Amelie Baud; Michael J Econs; Tatiana Foroud
Journal:  J Bone Miner Res       Date:  2014-07       Impact factor: 6.741

7.  Linkage mapping of femoral material properties in a reciprocal intercross of HcB-8 and HcB-23 recombinant mouse strains.

Authors:  Neema Saless; Gloria E Lopez Franco; Suzanne Litscher; Robbie S Kattappuram; Meghan J Houlihan; Ray Vanderby; Peter Demant; Robert D Blank
Journal:  Bone       Date:  2010-01-25       Impact factor: 4.398

8.  Genetic Dissection of Femoral and Tibial Microarchitecture.

Authors:  Lu Lu; Jinsong Huang; Fuyi Xu; Zhousheng Xiao; Jing Wang; Bing Zhang; Nicolae Valentin David; Danny Arends; Weikuan Gu; Cheryl Ackert-Bicknell; Olivia L Sabik; Charles R Farber; Leigh Darryl Quarles; Robert W Williams
Journal:  JBMR Plus       Date:  2019-11-11

9.  Weak Epistasis Generally Stabilizes Phenotypes in a Mouse Intercross.

Authors:  Anna L Tyler; Leah Rae Donahue; Gary A Churchill; Gregory W Carter
Journal:  PLoS Genet       Date:  2016-02-01       Impact factor: 5.917

  9 in total

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