Literature DB >> 18281717

Distinct form I, II, III, and IV Rubisco proteins from the three kingdoms of life provide clues about Rubisco evolution and structure/function relationships.

F Robert Tabita1, Sriram Satagopan, Thomas E Hanson, Nathan E Kreel, Stephanie S Scott.   

Abstract

There are four forms of ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) found in nature. Forms I, II, and III catalyse the carboxylation and oxygenation of ribulose 1,5-bisphosphate, while form IV, also called the Rubisco-like protein (RLP), does not catalyse either of these reactions. There appear to be six different clades of RLP. Although related to bona fide Rubisco proteins at the primary sequence and tertiary structure levels, RLP from two of these clades is known to perform other functions in the cell. Forms I, II, and III Rubisco, along with form IV (RLP), are thought to have evolved from a primordial archaeal Rubisco. Structure/function studies with both archaeal form III (methanogen) and form I (cyanobacterial) Rubisco have identified residues that appear to be specifically involved with interactions with molecular oxygen. A specific region of all form I, II, and III Rubisco was identified as being important for these interactions.

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Year:  2008        PMID: 18281717     DOI: 10.1093/jxb/erm361

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


  97 in total

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Authors:  Zheng Wang; Dagmar H Leary; Anthony P Malanoski; Robert W Li; W Judson Hervey; Brian J Eddie; Gabrielle S Tender; Shelley G Yanosky; Gary J Vora; Leonard M Tender; Baochuan Lin; Sarah M Strycharz-Glaven
Journal:  Appl Environ Microbiol       Date:  2014-11-14       Impact factor: 4.792

2.  Distribution and phylogenetic diversity of cbbM genes encoding RubisCO form II in a deep-sea hydrothermal field revealed by newly designed PCR primers.

Authors:  Shingo Kato; Michiyuki Nakawake; Moriya Ohkuma; Akihiko Yamagishi
Journal:  Extremophiles       Date:  2012-01-03       Impact factor: 2.395

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Authors:  Weidong Kong; David C Ream; John C Priscu; Rachael M Morgan-Kiss
Journal:  Appl Environ Microbiol       Date:  2012-04-06       Impact factor: 4.792

4.  Role of small subunit in mediating assembly of red-type form I Rubisco.

Authors:  Jidnyasa Joshi; Oliver Mueller-Cajar; Yi-Chin C Tsai; F Ulrich Hartl; Manajit Hayer-Hartl
Journal:  J Biol Chem       Date:  2014-11-04       Impact factor: 5.157

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Authors:  Jun Ye; Stephen D Joseph; Mukan Ji; Shaun Nielsen; David R G Mitchell; Scott Donne; Joseph Horvat; Jianli Wang; Paul Munroe; Torsten Thomas
Journal:  ISME J       Date:  2017-02-07       Impact factor: 10.302

6.  Functional assignment of multiple catabolic pathways for D-apiose.

Authors:  Michael S Carter; Xinshuai Zhang; Hua Huang; Jason T Bouvier; Brian San Francisco; Matthew W Vetting; Nawar Al-Obaidi; Jeffrey B Bonanno; Agnidipta Ghosh; Rémi G Zallot; Harvey M Andersen; Steven C Almo; John A Gerlt
Journal:  Nat Chem Biol       Date:  2018-06-04       Impact factor: 15.040

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Authors:  Ahmad F Khadem; Arjan Pol; Adam Wieczorek; Seyed S Mohammadi; Kees-Jan Francoijs; Henk G Stunnenberg; Mike S M Jetten; Huub J M Op den Camp
Journal:  J Bacteriol       Date:  2011-07-01       Impact factor: 3.490

8.  Ferredoxin:thioredoxin reductase (FTR) links the regulation of oxygenic photosynthesis to deeply rooted bacteria.

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Journal:  Planta       Date:  2012-12-06       Impact factor: 4.116

9.  Atmospheric trace gases support primary production in Antarctic desert surface soil.

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Journal:  Nature       Date:  2017-12-06       Impact factor: 49.962

Review 10.  Directing the evolution of Rubisco and Rubisco activase: first impressions of a new tool for photosynthesis research.

Authors:  Oliver Mueller-Cajar; Spencer M Whitney
Journal:  Photosynth Res       Date:  2008-07-15       Impact factor: 3.573

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