Literature DB >> 18281433

Traceability of Asian Matsutake, specialty mushrooms produced by the ectomycorrhizal basidiomycete Tricholoma matsutake, on the basis of retroelement-based DNA markers.

Hitoshi Murata1, Katsuhiko Babasaki, Tomoki Saegusa, Kenji Takemoto, Akiyoshi Yamada, Akira Ohta.   

Abstract

The ectomycorrhizal basidiomycete Tricholoma matsutake produces commercially valuable fruit bodies, matsutake, in forests. Here we report a PCR system targeting retroelement integration sites to differentiate among individual Asian isolates of T. matsutake based on their geographical origins, such as Japan, the area of South Korea through North Korea, the northeastern provinces of China, and the area of the southwestern provinces of China through Bhutan. The overall misjudgment rate of the analytical system was approximately 5% based on 95 samples of T. matsutake examined including those from cultures and from commodities. We also provide evidence that T. matsutake isolates grown throughout the Far East, including the northeastern provinces of China, are closely related to each other while distinct from those in the area of the southwestern provinces of China through Bhutan. The method allows us to trace back geographical origins of Asian matsutake, thus contributing to food safety, appropriate tariffs, and proper price setting.

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Year:  2008        PMID: 18281433      PMCID: PMC2292597          DOI: 10.1128/AEM.02411-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  22 in total

1.  A distal enhancer and an ultraconserved exon are derived from a novel retroposon.

Authors:  Gill Bejerano; Craig B Lowe; Nadav Ahituv; Bryan King; Adam Siepel; Sofie R Salama; Edward M Rubin; W James Kent; David Haussler
Journal:  Nature       Date:  2006-04-16       Impact factor: 49.962

2.  Evolution. Jumping genes hop into the evolutionary limelight.

Authors:  Elizabeth Pennisi
Journal:  Science       Date:  2007-08-17       Impact factor: 47.728

3.  Tricholoma matsutake in a natural Pinus densiflora forest: correspondence between above- and below-ground genets, association with multiple host trees and alteration of existing ectomycorrhizal communities.

Authors:  Chunlan Lian; Maki Narimatsu; Kazuhide Nara; Taizo Hogetsu
Journal:  New Phytol       Date:  2006       Impact factor: 10.151

4.  Ectomycorrhizal symbiosis in vitro between Tricholoma matsutake and Pinus densiflora seedlings that resembles naturally occurring 'shiro'.

Authors:  Akiyoshi Yamada; Ken Maeda; Hisayasu Kobayashi; Hitoshi Murata
Journal:  Mycorrhiza       Date:  2005-11-05       Impact factor: 3.387

5.  Genetic mosaics in the massive persisting rhizosphere colony "shiro" of the ectomycorrhizal basidiomycete Tricholoma matsutake.

Authors:  Hitoshi Murata; Akira Ohta; Akiyoshi Yamada; Maki Narimatsu; Norihiro Futamura
Journal:  Mycorrhiza       Date:  2005-04-14       Impact factor: 3.387

6.  Ancient and recent patterns of geographic speciation in the oyster mushroom Pleurotus revealed by phylogenetic analysis of ribosomal DNA sequences.

Authors:  R Vilgalys; B L Sun
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

7.  marY1, a member of the gypsy group of long terminal repeat retroelements from the ectomycorrhizal basidiomycete Tricholoma matsutake.

Authors:  H Murata; A Yamada
Journal:  Appl Environ Microbiol       Date:  2000-08       Impact factor: 4.792

8.  Highly polymorphic DNA markers to specify strains of the ectomycorrhizal basidiomycete Tricholoma matsutake based on sigmamarY1, the long terminal repeat of gypsy-type retroelement marY1.

Authors:  Hitoshi Murata; Katsuhiko Babasaki; Akiyoshi Yamada
Journal:  Mycorrhiza       Date:  2004-09-16       Impact factor: 3.387

9.  Genetic exchange and recombination in populations of the root-infecting fungus Armillaria gallica.

Authors:  B J Saville; H Yoell; J B Anderson
Journal:  Mol Ecol       Date:  1996-08       Impact factor: 6.185

10.  Single nucleotide polymorphisms in the ectomycorrhizal mushroom Tricholoma matsutake.

Authors:  Jianping Xu; Hong Guo; Zhu-Liang Yang
Journal:  Microbiology       Date:  2007-07       Impact factor: 2.777

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  7 in total

1.  IRAP and REMAP based genetic diversity among varieties of Lallemantia iberica.

Authors:  Arezoo Cheraghi; Fatemeh Rahmani; Abdollah Hassanzadeh-Ghorttapeh
Journal:  Mol Biol Res Commun       Date:  2018-09

2.  Development of new molecular markers for the Colletotrichum genus using RetroCl1 sequences.

Authors:  Leandro Vieira Dos Santos; Marisa Vieira de Queiroz; Mateus Ferreira Santana; Marcos Antônio Soares; Everaldo Gonçalves de Barros; Elza Fernandes de Araújo; Thierry Langin
Journal:  World J Microbiol Biotechnol       Date:  2011-10-01       Impact factor: 3.312

3.  Mobile DNA distributions refine the phylogeny of "matsutake" mushrooms, Tricholoma sect. Caligata.

Authors:  Hitoshi Murata; Yuko Ota; Muneyoshi Yamaguchi; Akiyoshi Yamada; Shinichiro Katahata; Yuichiro Otsuka; Katsuhiko Babasaki; Hitoshi Neda
Journal:  Mycorrhiza       Date:  2013-02-26       Impact factor: 3.387

4.  In vitro ectomycorrhizal specificity between the Asian red pine Pinus densiflora and Tricholoma matsutake and allied species from worldwide Pinaceae and Fagaceae forests.

Authors:  Akiyoshi Yamada; Hisayasu Kobayashi; Hitoshi Murata; Erbil Kalmiş; Fatih Kalyoncu; Masaki Fukuda
Journal:  Mycorrhiza       Date:  2009-11-26       Impact factor: 3.387

5.  A qPCR assay that specifically quantifies Tricholoma matsutake biomass in natural soil.

Authors:  Muneyoshi Yamaguchi; Maki Narimatsu; Toru Fujita; Masataka Kawai; Hisayasu Kobayashi; Akira Ohta; Akiyoshi Yamada; Norihisa Matsushita; Hitoshi Neda; Tomoko Shimokawa; Hitoshi Murata
Journal:  Mycorrhiza       Date:  2016-07-01       Impact factor: 3.387

6.  Traceability of marketable Japanese shoro in New Zealand: using multiplex PCR to exploit phylogeographic variation among taxa in the Rhizopogon subgenus Roseoli.

Authors:  Sandra B Visnovsky; Alexis Guerin-Laguette; Yun Wang; Andrew R Pitman
Journal:  Appl Environ Microbiol       Date:  2009-11-13       Impact factor: 4.792

7.  Local-Level Genetic Diversity and Structure of Matsutake Mushroom (Tricholoma matsutake) Populations in Nagano Prefecture, Japan, Revealed by 15 Microsatellite Markers.

Authors:  Hiroyuki Kurokochi; Shijie Zhang; Yoshie Takeuchi; Engkong Tan; Shuichi Asakawa; Chunlan Lian
Journal:  J Fungi (Basel)       Date:  2017-05-11
  7 in total

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